Protein–RNA interactions for Protein: Q9BQ66

KRTAP4-12, Keratin-associated protein 4-12, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-12Q9BQ66 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 FLII-221ENST00000578558 2377 ntTSL 5 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 GALNTL6-204ENST00000508122 1755 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 PYY2-201ENST00000315776 282 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 PMF1-BGLAP-201ENST00000320139 773 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 AL596028.1-201ENST00000326971 197 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 RNA5SP138-201ENST00000365098 114 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 RHOC-205ENST00000369636 786 ntTSL 2 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 RNA5SP176-201ENST00000390956 110 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 HPN-AS1-201ENST00000392227 1124 ntTSL 2 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 SERF2-209ENST00000409646 559 ntTSL 4 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 RIPPLY1-202ENST00000411805 786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 GSTK1-205ENST00000443571 850 ntTSL 2 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 AC023137.1-201ENST00000448241 308 ntTSL 4 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 AC125238.1-201ENST00000448842 249 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 RN7SL672P-201ENST00000474091 317 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 HMGN2P9-201ENST00000476875 229 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 RN7SL578P-201ENST00000477781 283 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 RN7SL838P-201ENST00000481676 295 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 RPS18P9-201ENST00000482817 460 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 RN7SL530P-201ENST00000485097 298 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 RN7SL375P-201ENST00000492442 298 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 AC008026.2-201ENST00000495438 348 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 AL450346.2-201ENST00000495602 1024 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 AC026412.1-206ENST00000502273 206 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 SCGB1D5P-201ENST00000515134 247 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 RNU6-948P-201ENST00000516374 107 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 RNU6-1258P-201ENST00000516911 111 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 COX6C-203ENST00000518171 724 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 KRT18P37-201ENST00000520711 1282 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 BMF-206ENST00000558774 671 ntTSL 3 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 EEF1DP7-201ENST00000580496 513 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 RN7SL524P-201ENST00000581152 300 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 AC233702.9-201ENST00000581528 203 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 AC090897.2-201ENST00000581715 130 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 MIR3117-201ENST00000584034 78 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 AC025682.1-203ENST00000584391 442 ntTSL 2 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 TMED1-204ENST00000588289 541 ntTSL 2 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 AC006116.3-201ENST00000592968 361 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 KXD1-210ENST00000599000 498 ntTSL 2 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 Metazoa_SRP.71-201ENST00000612122 282 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 AC005790.1-201ENST00000619774 450 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 AP000769.1-203ENST00000637245 208 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 MAPK10-261ENST00000641050 3109 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 AC232271.1-201ENST00000602455 2715 ntBASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 SGK1-201ENST00000237305 2401 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP4-12Q9BQ66 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms