Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 ZNF663P-202ENST00000641770 1131 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 TMPRSS4-218ENST00000534111 5550 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 CACNA2D4-222ENST00000587995 3883 ntTSL 5 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 CACNA1C-212ENST00000399621 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 CACNA1C-215ENST00000399637 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 CACNA1C-221ENST00000402845 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 HSPA8P11-201ENST00000508840 1898 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 KCNMA1-259ENST00000639406 5567 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 RPL12P38-202ENST00000588627 2319 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 RNU6-723P-201ENST00000383973 107 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 CCNB2P1-201ENST00000399411 1150 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 GSTA10P-201ENST00000412182 576 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 MTND4P6-201ENST00000438297 472 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AL512326.1-201ENST00000443050 721 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 OR2L9P-201ENST00000444456 913 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AC005532.2-201ENST00000467154 373 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AC017007.3-201ENST00000479865 435 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AP002453.1-201ENST00000492327 668 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 EIF3LP3-201ENST00000495197 822 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 CENPUP1-201ENST00000526649 1202 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 ZNF705CP-201ENST00000530515 889 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AC006065.2-201ENST00000536978 211 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AC084824.1-201ENST00000550917 1005 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 SUMO2P15-201ENST00000604285 278 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AC013244.3-201ENST00000605614 388 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AL591926.4-201ENST00000616895 298 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AL121895.2-201ENST00000619558 447 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AL035661.1-201ENST00000620459 1144 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AC092692.1-201ENST00000623625 2595 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AASS-202ENST00000393376 3233 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 TARS-202ENST00000455217 2523 ntTSL 2 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AL354854.1-201ENST00000455940 1363 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 SYK-201ENST00000375746 4990 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 OFD1P9Y-201ENST00000417699 1491 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 JAKMIP2-202ENST00000333010 2992 ntTSL 2 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AC126755.2-208ENST00000327792 462 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AC138969.1-213ENST00000331436 462 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 NOX1-203ENST00000372964 661 ntTSL 2 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 ZNF736P10Y-201ENST00000403990 1110 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 RN7SKP273-201ENST00000411392 314 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 PAICSP2-201ENST00000429118 1150 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 RPL12P28-201ENST00000430852 489 ntBASIC2.12□□□□□ -2.07
HMCN1Q96RW7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
HMCN1Q96RW7 SETP8-201ENST00000435341 628 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms