Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AL121768.1-201ENST00000613917 2544 ntBASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 AP001541.1-201ENST00000623322 1904 ntBASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 RN7SKP104-201ENST00000362605 328 ntBASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 MIR1204-201ENST00000408388 67 ntBASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 CYCSP52-201ENST00000422857 310 ntBASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 OR5W1P-201ENST00000423705 938 ntBASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 OR9L1P-201ENST00000529493 933 ntBASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 AP000662.1-201ENST00000530952 487 ntBASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 AC026951.2-201ENST00000613847 241 ntBASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 MYO7B-202ENST00000409816 6694 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 CLIP1-219ENST00000620786 5913 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CSMD1Q96PZ7 RP1-201ENST00000220676 7100 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 RPS16P5-201ENST00000406501 404 ntBASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 CYP4F29P-201ENST00000420685 446 ntBASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 CARD8-203ENST00000447740 5210 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 ATP5J2P6-201ENST00000565203 266 ntBASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 AC012254.3-201ENST00000591183 2117 ntBASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 ATM-215ENST00000530958 5718 ntTSL 2 BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 ATP1A2-201ENST00000361216 5421 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 AP004289.1-201ENST00000436307 2205 ntBASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 RNA5SP131-201ENST00000365452 119 ntBASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 MORF4L1P5-201ENST00000433352 961 ntBASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 AL110118.1-201ENST00000553543 400 ntBASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 AC087783.2-201ENST00000605070 562 ntBASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 MYO18A-202ENST00000527372 9992 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
CSMD1Q96PZ7 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.09□□□□□ -1.6
CSMD1Q96PZ7 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.09□□□□□ -1.6
CSMD1Q96PZ7 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.09□□□□□ -1.6
CSMD1Q96PZ7 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.6
CSMD1Q96PZ7 ITIH6-201ENST00000218436 4968 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CSMD1Q96PZ7 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
CSMD1Q96PZ7 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CSMD1Q96PZ7 AL353796.1-201ENST00000561542 3241 ntBASIC5.09□□□□□ -1.6
CSMD1Q96PZ7 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
CSMD1Q96PZ7 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
CSMD1Q96PZ7 AC016739.1-201ENST00000405359 345 ntBASIC5.09□□□□□ -1.6
CSMD1Q96PZ7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.09□□□□□ -1.6
CSMD1Q96PZ7 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.09□□□□□ -1.6
CSMD1Q96PZ7 RPL7P61-201ENST00000451721 751 ntBASIC5.09□□□□□ -1.6
CSMD1Q96PZ7 AL389915.2-201ENST00000454576 441 ntBASIC5.09□□□□□ -1.6
CSMD1Q96PZ7 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.09□□□□□ -1.6
CSMD1Q96PZ7 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.09□□□□□ -1.6
CSMD1Q96PZ7 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.09□□□□□ -1.6
CSMD1Q96PZ7 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 LAMA3-203ENST00000399516 9834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 SNORA11C-201ENST00000408532 129 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 RPS3AP41-201ENST00000462701 778 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 AC126915.2-201ENST00000610957 190 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 COL4A6-203ENST00000394872 6750 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms