Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SNX18P26-201ENST00000458433 740 ntBASIC6.01□□□□□ -1.45
COL21A1Q96P44 SNRPCP11-201ENST00000492453 205 ntBASIC6.01□□□□□ -1.45
COL21A1Q96P44 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL21A1Q96P44 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 BCAS2P1-201ENST00000528022 632 ntBASIC6.01□□□□□ -1.45
COL21A1Q96P44 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 MIR4420-201ENST00000583944 77 ntBASIC6.01□□□□□ -1.45
COL21A1Q96P44 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 AC005479.3-201ENST00000602790 431 ntBASIC6.01□□□□□ -1.45
COL21A1Q96P44 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL21A1Q96P44 AC024255.1-201ENST00000614376 102 ntBASIC6.01□□□□□ -1.45
COL21A1Q96P44 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.01□□□□□ -1.45
COL21A1Q96P44 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL21A1Q96P44 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL21A1Q96P44 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.01□□□□□ -1.45
COL21A1Q96P44 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL21A1Q96P44 AC011815.2-201ENST00000618230 2021 ntBASIC6.01□□□□□ -1.45
COL21A1Q96P44 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL21A1Q96P44 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL21A1Q96P44 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL21A1Q96P44 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6□□□□□ -1.45
COL21A1Q96P44 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
COL21A1Q96P44 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL21A1Q96P44 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6□□□□□ -1.45
COL21A1Q96P44 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6□□□□□ -1.45
COL21A1Q96P44 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL21A1Q96P44 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
COL21A1Q96P44 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6□□□□□ -1.45
COL21A1Q96P44 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6□□□□□ -1.45
COL21A1Q96P44 AC011455.2-201ENST00000599320 3336 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6□□□□□ -1.45
COL21A1Q96P44 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6□□□□□ -1.45
COL21A1Q96P44 RNU1-59P-201ENST00000364829 162 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 RNA5SP85-201ENST00000365378 119 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6□□□□□ -1.45
COL21A1Q96P44 AL034417.1-201ENST00000399343 800 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 CYP2AC1P-201ENST00000407830 1173 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 RN7SKP161-201ENST00000411110 305 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 HMGA1P8-201ENST00000414130 321 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6□□□□□ -1.45
COL21A1Q96P44 AC128677.1-201ENST00000436016 442 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 LDHAP2-201ENST00000437325 985 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 AC064862.5-201ENST00000440618 334 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 RPS18P1-201ENST00000447840 458 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6□□□□□ -1.45
COL21A1Q96P44 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6□□□□□ -1.45
COL21A1Q96P44 RPL3P13-201ENST00000550415 216 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL21A1Q96P44 AL121579.2-201ENST00000555466 590 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 AC037479.1-201ENST00000558361 625 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 AC007494.1-201ENST00000562293 760 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6□□□□□ -1.45
COL21A1Q96P44 MIR212-201ENST00000586026 110 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6□□□□□ -1.45
COL21A1Q96P44 AC004805.3-201ENST00000603178 310 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 AC019257.2-201ENST00000605539 497 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 AC024589.2-201ENST00000605642 1294 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6□□□□□ -1.45
COL21A1Q96P44 AL589743.6-201ENST00000611025 117 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 U1.25-201ENST00000614085 162 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 MIR6085-201ENST00000618314 110 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 U1.34-201ENST00000618578 162 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 U1.31-201ENST00000620022 160 ntBASIC6□□□□□ -1.45
COL21A1Q96P44 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6□□□□□ -1.45
COL21A1Q96P44 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6□□□□□ -1.45
COL21A1Q96P44 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL21A1Q96P44 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6□□□□□ -1.45
COL21A1Q96P44 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6□□□□□ -1.45
COL21A1Q96P44 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
COL21A1Q96P44 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6□□□□□ -1.45
COL21A1Q96P44 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL21A1Q96P44 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
COL21A1Q96P44 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
COL21A1Q96P44 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL21A1Q96P44 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL21A1Q96P44 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 AC005702.3-201ENST00000585345 1447 ntBASIC5.99□□□□□ -1.45
COL21A1Q96P44 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL21A1Q96P44 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL21A1Q96P44 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 SAGE3P-201ENST00000619800 1635 ntBASIC5.99□□□□□ -1.45
COL21A1Q96P44 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL21A1Q96P44 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms