Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 OR5M2P-202ENST00000641241 4242 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 PSMC1P4-201ENST00000515236 1327 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 SNORA63-201ENST00000363450 132 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 RNU6-553P-201ENST00000364047 96 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 COX6A1P3-201ENST00000404167 293 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 VN1R36P-201ENST00000414936 291 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC012498.1-201ENST00000424037 437 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 NPM1P22-201ENST00000427761 952 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AL604028.2-201ENST00000437848 788 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC007000.2-201ENST00000442564 487 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AL137074.1-201ENST00000442640 465 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 ANKRD30BP3-201ENST00000444850 1070 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 YAP1P2-201ENST00000455104 610 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 MTND1P11-201ENST00000456661 876 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC020779.1-201ENST00000478757 796 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 RPL23AP80-201ENST00000495605 424 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 RNU6-718P-201ENST00000516166 105 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 PTK2-220ENST00000520151 573 ntTSL 4 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AP000435.1-201ENST00000528539 496 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AP002963.1-201ENST00000530590 184 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC068631.3-201ENST00000538831 225 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AL121766.1-201ENST00000547436 487 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC022146.1-201ENST00000595307 847 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC020910.2-201ENST00000603635 610 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC005070.2-201ENST00000604391 260 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC090578.1-201ENST00000604955 591 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AC004852.1-201ENST00000605206 154 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AL136139.1-201ENST00000605568 222 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 Six3os1_2.1-201ENST00000616963 217 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 CR381670.1-201ENST00000624291 1693 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 LRRC37A9P-201ENST00000603850 5376 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TRIM47Q96LD4 PHF2P2-202ENST00000444553 2865 ntBASIC8.87□□□□□ -0.99
TRIM47Q96LD4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 AC008033.1-201ENST00000216407 1162 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 RCAN3-203ENST00000412742 667 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM47Q96LD4 EEF1A1P40-201ENST00000412883 573 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 RPL36P1-201ENST00000419720 225 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 RPS27AP7-201ENST00000422792 455 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 AC012519.1-201ENST00000424588 610 ntBASIC8.86□□□□□ -0.99
TRIM47Q96LD4 KCTD9P1-201ENST00000430462 1167 ntBASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms