Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC022832.1-201ENST00000530718 645 ntBASIC4.88□□□□□ -1.63
VPS13CQ709C8 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 AC087783.2-201ENST00000605070 562 ntBASIC4.88□□□□□ -1.63
VPS13CQ709C8 AC141002.1-201ENST00000607025 279 ntBASIC4.88□□□□□ -1.63
VPS13CQ709C8 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 SLC24A1-202ENST00000339868 5678 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 SPATA31E2P-201ENST00000554414 4965 ntBASIC4.88□□□□□ -1.63
VPS13CQ709C8 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 RPS2P45-201ENST00000469997 2057 ntBASIC4.88□□□□□ -1.63
VPS13CQ709C8 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 PSMC1P2-201ENST00000423961 1204 ntBASIC4.88□□□□□ -1.63
VPS13CQ709C8 RPS3AP15-201ENST00000483874 781 ntBASIC4.88□□□□□ -1.63
VPS13CQ709C8 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 MAMLD1-204ENST00000426613 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 COL4A4-201ENST00000396625 9895 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 AKAP12-202ENST00000354675 6287 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 CEP41-217ENST00000541543 6222 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 SCN5A-208ENST00000450102 6284 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 KIF24-202ENST00000402558 6131 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 OR52B5P-201ENST00000435337 951 ntBASIC4.88□□□□□ -1.63
VPS13CQ709C8 AL772161.1-201ENST00000439130 476 ntBASIC4.88□□□□□ -1.63
VPS13CQ709C8 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 LAPTM4BP2-201ENST00000604542 446 ntBASIC4.88□□□□□ -1.63
VPS13CQ709C8 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS13CQ709C8 OR52B5P-202ENST00000641118 1110 ntBASIC4.88□□□□□ -1.63
VPS13CQ709C8 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 FO082842.1-201ENST00000423552 1370 ntBASIC4.88□□□□□ -1.63
VPS13CQ709C8 AL162456.1-201ENST00000634535 2006 ntBASIC4.88□□□□□ -1.63
VPS13CQ709C8 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.88□□□□□ -1.63
VPS13CQ709C8 FAM83F-201ENST00000333407 15561 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS13CQ709C8 MAPK10-263ENST00000641052 4307 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 RNA5SP333-201ENST00000363466 118 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 RNA5SP334-201ENST00000364825 118 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 RPL37AP8-201ENST00000494116 276 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 RNU6-615P-201ENST00000516065 106 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 AL359091.1-201ENST00000449048 1734 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 CNTNAP3B-211ENST00000612828 7455 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 RASSF2-201ENST00000379376 5282 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 AC137056.2-201ENST00000624055 1958 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 RAB28P1-201ENST00000411517 641 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 AC009237.1-201ENST00000442127 744 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 DNAJB5P1-201ENST00000454004 806 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 RPEP1-201ENST00000504507 658 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 PHF8-204ENST00000357988 6024 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 TSPAN14-206ENST00000372164 5476 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.87□□□□□ -1.63
VPS13CQ709C8 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 AP002370.1-201ENST00000528055 1602 ntBASIC4.87□□□□□ -1.63
VPS13CQ709C8 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 RTL10-203ENST00000407472 6523 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS13CQ709C8 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms