Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
RIF1Q5UIP0 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RIF1Q5UIP0 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
RIF1Q5UIP0 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 AL161756.3-201ENST00000641216 2071 ntBASIC6.14□□□□□ -1.43
RIF1Q5UIP0 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 COL6A4P1-202ENST00000487147 4317 ntBASIC6.14□□□□□ -1.43
RIF1Q5UIP0 AC104837.1-201ENST00000444644 1587 ntBASIC6.14□□□□□ -1.43
RIF1Q5UIP0 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 RPS7P8-201ENST00000418311 581 ntBASIC6.14□□□□□ -1.43
RIF1Q5UIP0 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 RPL7P6-201ENST00000480903 738 ntBASIC6.14□□□□□ -1.43
RIF1Q5UIP0 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 RN7SL708P-201ENST00000580952 299 ntBASIC6.14□□□□□ -1.43
RIF1Q5UIP0 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 MIR23A-201ENST00000385245 73 ntBASIC6.14□□□□□ -1.43
RIF1Q5UIP0 AL645733.1-201ENST00000402250 217 ntBASIC6.14□□□□□ -1.43
RIF1Q5UIP0 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 LINC01718-201ENST00000441660 391 ntTSL 2 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 AC022206.1-201ENST00000495947 347 ntBASIC6.14□□□□□ -1.43
RIF1Q5UIP0 AL591767.3-201ENST00000554632 525 ntBASIC6.14□□□□□ -1.43
RIF1Q5UIP0 MIR4330-201ENST00000579077 105 ntBASIC6.14□□□□□ -1.43
RIF1Q5UIP0 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 AC010333.3-201ENST00000615100 402 ntBASIC6.14□□□□□ -1.43
RIF1Q5UIP0 SMIM2-AS1-203ENST00000618753 2101 ntTSL 4 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RIF1Q5UIP0 MAP3K7CL-202ENST00000339024 2066 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 RAB28P2-201ENST00000454299 641 ntBASIC6.13□□□□□ -1.43
RIF1Q5UIP0 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 AC073065.1-201ENST00000411678 2866 ntBASIC6.13□□□□□ -1.43
RIF1Q5UIP0 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 SYNJ1-202ENST00000382491 6958 ntTSL 5 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 TTC3P1-201ENST00000399586 6081 ntBASIC6.13□□□□□ -1.43
RIF1Q5UIP0 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 AF287957.1-201ENST00000607368 1595 ntBASIC6.13□□□□□ -1.43
RIF1Q5UIP0 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 RPL35AP3-201ENST00000414680 288 ntBASIC6.13□□□□□ -1.43
RIF1Q5UIP0 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 RPS23P6-201ENST00000466136 431 ntBASIC6.13□□□□□ -1.43
RIF1Q5UIP0 AC091153.1-201ENST00000466297 402 ntBASIC6.13□□□□□ -1.43
RIF1Q5UIP0 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 AC015802.2-201ENST00000589690 189 ntBASIC6.13□□□□□ -1.43
RIF1Q5UIP0 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 AC087763.1-201ENST00000603391 286 ntBASIC6.13□□□□□ -1.43
RIF1Q5UIP0 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.13□□□□□ -1.43
RIF1Q5UIP0 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms