Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PTCH1Q13635 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
PTCH1Q13635 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTCH1Q13635 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PTCH1Q13635 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC8.68□□□□□ -1.02
PTCH1Q13635 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTCH1Q13635 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC8.68□□□□□ -1.02
PTCH1Q13635 AP003119.3-201ENST00000566747 4192 ntBASIC8.68□□□□□ -1.02
PTCH1Q13635 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTCH1Q13635 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC8.68□□□□□ -1.02
PTCH1Q13635 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PTCH1Q13635 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTCH1Q13635 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
PTCH1Q13635 OR3A2-201ENST00000408891 1076 ntBASIC8.68□□□□□ -1.02
PTCH1Q13635 AC245060.4-201ENST00000413293 1121 ntBASIC8.68□□□□□ -1.02
PTCH1Q13635 RPL35AP31-201ENST00000418340 337 ntBASIC8.68□□□□□ -1.02
PTCH1Q13635 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC8.68□□□□□ -1.02
PTCH1Q13635 AL355433.1-201ENST00000422804 300 ntBASIC8.68□□□□□ -1.02
PTCH1Q13635 AL445466.1-201ENST00000448432 357 ntBASIC8.68□□□□□ -1.02
PTCH1Q13635 GAS5-218ENST00000448718 565 ntTSL 2 BASIC8.68□□□□□ -1.02
PTCH1Q13635 RPSAP37-201ENST00000470913 821 ntBASIC8.68□□□□□ -1.02
PTCH1Q13635 RPL32P9-201ENST00000487963 407 ntBASIC8.68□□□□□ -1.02
PTCH1Q13635 RPS23P1-201ENST00000491662 432 ntBASIC8.68□□□□□ -1.02
PTCH1Q13635 AC112191.2-201ENST00000522428 333 ntBASIC8.68□□□□□ -1.02
PTCH1Q13635 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC8.68□□□□□ -1.02
PTCH1Q13635 DCN-209ENST00000546745 1026 ntTSL 3 BASIC8.68□□□□□ -1.02
PTCH1Q13635 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC8.68□□□□□ -1.02
PTCH1Q13635 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC8.68□□□□□ -1.02
PTCH1Q13635 AC005244.1-201ENST00000582566 339 ntBASIC8.68□□□□□ -1.02
PTCH1Q13635 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC8.68□□□□□ -1.02
PTCH1Q13635 AF117829.2-201ENST00000619538 361 ntBASIC8.68□□□□□ -1.02
PTCH1Q13635 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC8.68□□□□□ -1.02
PTCH1Q13635 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC8.68□□□□□ -1.02
PTCH1Q13635 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC8.68□□□□□ -1.02
PTCH1Q13635 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.68□□□□□ -1.02
PTCH1Q13635 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
PTCH1Q13635 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
PTCH1Q13635 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTCH1Q13635 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTCH1Q13635 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTCH1Q13635 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PTCH1Q13635 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
PTCH1Q13635 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTCH1Q13635 AC104581.5-201ENST00000624171 7141 ntBASIC8.67□□□□□ -1.02
PTCH1Q13635 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
PTCH1Q13635 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC8.67□□□□□ -1.02
PTCH1Q13635 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTCH1Q13635 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC8.67□□□□□ -1.02
PTCH1Q13635 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC8.67□□□□□ -1.02
PTCH1Q13635 AC245884.2-201ENST00000426257 404 ntBASIC8.67□□□□□ -1.02
PTCH1Q13635 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC8.67□□□□□ -1.02
PTCH1Q13635 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTCH1Q13635 AC231760.1-201ENST00000498002 260 ntBASIC8.67□□□□□ -1.02
PTCH1Q13635 AC106872.5-201ENST00000508856 1416 ntBASIC8.67□□□□□ -1.02
PTCH1Q13635 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC8.67□□□□□ -1.02
PTCH1Q13635 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC8.67□□□□□ -1.02
PTCH1Q13635 AC092821.2-201ENST00000545710 2042 ntBASIC8.67□□□□□ -1.02
PTCH1Q13635 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC8.67□□□□□ -1.02
PTCH1Q13635 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.67□□□□□ -1.02
PTCH1Q13635 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC8.67□□□□□ -1.02
PTCH1Q13635 AC005332.9-201ENST00000620266 2921 ntBASIC8.67□□□□□ -1.02
PTCH1Q13635 MAPK10-344ENST00000641718 3746 ntBASIC8.67□□□□□ -1.02
PTCH1Q13635 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
PTCH1Q13635 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
PTCH1Q13635 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTCH1Q13635 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTCH1Q13635 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.67□□□□□ -1.02
PTCH1Q13635 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC8.67□□□□□ -1.02
PTCH1Q13635 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC8.66□□□□□ -1.02
PTCH1Q13635 AC027088.4-201ENST00000611559 1947 ntBASIC8.66□□□□□ -1.02
PTCH1Q13635 AC110373.1-201ENST00000505994 3505 ntBASIC8.66□□□□□ -1.02
PTCH1Q13635 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PTCH1Q13635 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTCH1Q13635 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
PTCH1Q13635 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTCH1Q13635 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC8.66□□□□□ -1.02
PTCH1Q13635 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTCH1Q13635 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTCH1Q13635 OR2M1P-201ENST00000318104 951 ntBASIC8.66□□□□□ -1.02
PTCH1Q13635 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTCH1Q13635 SNORA43.1-201ENST00000364863 140 ntBASIC8.66□□□□□ -1.02
PTCH1Q13635 CRP-204ENST00000368112 787 ntTSL 2 BASIC8.66□□□□□ -1.02
PTCH1Q13635 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTCH1Q13635 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC8.66□□□□□ -1.02
PTCH1Q13635 RPL35AP3-201ENST00000414680 288 ntBASIC8.66□□□□□ -1.02
PTCH1Q13635 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC8.66□□□□□ -1.02
PTCH1Q13635 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC8.66□□□□□ -1.02
PTCH1Q13635 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC8.66□□□□□ -1.02
PTCH1Q13635 RANP2-201ENST00000456833 229 ntBASIC8.66□□□□□ -1.02
PTCH1Q13635 RN7SL610P-201ENST00000463845 291 ntBASIC8.66□□□□□ -1.02
PTCH1Q13635 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC8.66□□□□□ -1.02
PTCH1Q13635 AL122020.1-201ENST00000472287 459 ntBASIC8.66□□□□□ -1.02
PTCH1Q13635 AC091965.3-201ENST00000506236 208 ntBASIC8.66□□□□□ -1.02
PTCH1Q13635 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC8.66□□□□□ -1.02
PTCH1Q13635 GNG2-208ENST00000554875 430 ntTSL 5 BASIC8.66□□□□□ -1.02
PTCH1Q13635 AC027229.1-201ENST00000583887 253 ntBASIC8.66□□□□□ -1.02
PTCH1Q13635 AC020916.2-201ENST00000591242 360 ntBASIC8.66□□□□□ -1.02
PTCH1Q13635 AL133243.4-201ENST00000623116 3109 ntBASIC8.66□□□□□ -1.02
PTCH1Q13635 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC8.66□□□□□ -1.02
PTCH1Q13635 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms