Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SOX4Q06945 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.64□□□□□ -1.19
SOX4Q06945 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SOX4Q06945 AL390237.1-201ENST00000404226 1415 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX4Q06945 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX4Q06945 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SOX4Q06945 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SOX4Q06945 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SOX4Q06945 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SOX4Q06945 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SOX4Q06945 AL353625.1-202ENST00000366273 571 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
SOX4Q06945 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC7.64□□□□□ -1.19
SOX4Q06945 AC006511.2-201ENST00000388966 660 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 AL451046.1-201ENST00000406097 534 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 PRELID1P2-201ENST00000407805 396 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX4Q06945 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX4Q06945 CDY17P-201ENST00000414121 1282 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.64□□□□□ -1.19
SOX4Q06945 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.64□□□□□ -1.19
SOX4Q06945 RPS3AP37-201ENST00000419176 745 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 AC009500.1-201ENST00000420684 583 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX4Q06945 CDY8P-201ENST00000428380 1279 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 E2F6P1-201ENST00000428850 745 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC7.64□□□□□ -1.19
SOX4Q06945 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.64□□□□□ -1.19
SOX4Q06945 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
SOX4Q06945 AL604028.2-201ENST00000437848 788 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.64□□□□□ -1.19
SOX4Q06945 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX4Q06945 E2F6P3-201ENST00000441743 743 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 CDY20P-201ENST00000447528 1279 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX4Q06945 NDUFA12P1-201ENST00000455914 406 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 VN1R6P-201ENST00000458417 907 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 RPS7P7-201ENST00000463499 571 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC7.64□□□□□ -1.19
SOX4Q06945 STRADBP1-201ENST00000478954 1281 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 RN7SL849P-201ENST00000485236 295 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 RN7SL797P-201ENST00000486314 297 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 RPS12P31-201ENST00000491419 398 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SOX4Q06945 AC080014.1-201ENST00000496877 1201 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 AC139272.1-201ENST00000505516 640 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SOX4Q06945 AC146944.3-201ENST00000509969 371 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
SOX4Q06945 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC7.64□□□□□ -1.19
SOX4Q06945 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX4Q06945 RN7SKP11-201ENST00000517018 287 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
SOX4Q06945 OR4A1P-201ENST00000532342 920 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 PHBP2-201ENST00000532859 806 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 AC007115.1-201ENST00000546853 234 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC7.64□□□□□ -1.19
SOX4Q06945 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX4Q06945 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX4Q06945 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC7.64□□□□□ -1.19
SOX4Q06945 AL035411.2-201ENST00000604022 421 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 AC016727.1-205ENST00000605437 569 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 AC104184.1-201ENST00000607513 721 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 AC080013.4-201ENST00000607624 649 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX4Q06945 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX4Q06945 AC121761.2-201ENST00000617300 689 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
SOX4Q06945 AC130456.6-201ENST00000623745 765 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 AC005753.1-201ENST00000623837 618 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 AL160394.1-201ENST00000624765 724 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 UGP2-231ENST00000627474 264 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX4Q06945 GMFB-210ENST00000628554 639 ntTSL 4 BASIC7.64□□□□□ -1.19
SOX4Q06945 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
SOX4Q06945 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SOX4Q06945 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC7.64□□□□□ -1.19
SOX4Q06945 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SOX4Q06945 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SOX4Q06945 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC7.64□□□□□ -1.19
SOX4Q06945 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
SOX4Q06945 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
SOX4Q06945 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC7.64□□□□□ -1.19
SOX4Q06945 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
SOX4Q06945 HSPD1P4-201ENST00000547203 1702 ntBASIC7.64□□□□□ -1.19
SOX4Q06945 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 AC087501.5-201ENST00000607496 2374 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
SOX4Q06945 KARSP3-201ENST00000571212 1504 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
SOX4Q06945 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 TRIM53CP-201ENST00000531490 1354 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 224.5 ms