Protein–RNA interactions for Protein: Q03468

ERCC6, DNA excision repair protein ERCC-6, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6Q03468 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ERCC6Q03468 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
ERCC6Q03468 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ERCC6Q03468 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ERCC6Q03468 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ERCC6Q03468 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ERCC6Q03468 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
ERCC6Q03468 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
ERCC6Q03468 PSMD10P3-201ENST00000437000 448 ntBASIC10.59□□□□□ -0.71
ERCC6Q03468 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC10.59□□□□□ -0.71
ERCC6Q03468 SUMO2P7-201ENST00000511179 285 ntBASIC10.59□□□□□ -0.71
ERCC6Q03468 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC10.59□□□□□ -0.71
ERCC6Q03468 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
ERCC6Q03468 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC10.59□□□□□ -0.71
ERCC6Q03468 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC10.59□□□□□ -0.71
ERCC6Q03468 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC10.59□□□□□ -0.71
ERCC6Q03468 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ERCC6Q03468 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
ERCC6Q03468 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ERCC6Q03468 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
ERCC6Q03468 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC10.59□□□□□ -0.71
ERCC6Q03468 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
ERCC6Q03468 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
ERCC6Q03468 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ERCC6Q03468 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
ERCC6Q03468 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ERCC6Q03468 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ERCC6Q03468 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
ERCC6Q03468 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC10.58□□□□□ -0.72
ERCC6Q03468 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
ERCC6Q03468 RNA5SP234-201ENST00000363916 119 ntBASIC10.58□□□□□ -0.72
ERCC6Q03468 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC10.58□□□□□ -0.72
ERCC6Q03468 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
ERCC6Q03468 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC10.58□□□□□ -0.72
ERCC6Q03468 NME1P1-201ENST00000420914 382 ntBASIC10.58□□□□□ -0.72
ERCC6Q03468 RN7SL817P-201ENST00000480777 288 ntBASIC10.58□□□□□ -0.72
ERCC6Q03468 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC10.58□□□□□ -0.72
ERCC6Q03468 AC079841.1-201ENST00000481228 950 ntBASIC10.58□□□□□ -0.72
ERCC6Q03468 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC10.58□□□□□ -0.72
ERCC6Q03468 AC096996.1-201ENST00000563813 325 ntBASIC10.58□□□□□ -0.72
ERCC6Q03468 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC10.58□□□□□ -0.72
ERCC6Q03468 MIR8080-201ENST00000622224 89 ntBASIC10.58□□□□□ -0.72
ERCC6Q03468 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC10.58□□□□□ -0.72
ERCC6Q03468 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ERCC6Q03468 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
ERCC6Q03468 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
ERCC6Q03468 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
ERCC6Q03468 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC10.58□□□□□ -0.72
ERCC6Q03468 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC10.58□□□□□ -0.72
ERCC6Q03468 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ERCC6Q03468 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ERCC6Q03468 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC10.57□□□□□ -0.72
ERCC6Q03468 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ERCC6Q03468 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ERCC6Q03468 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ERCC6Q03468 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
ERCC6Q03468 METTL15P3-201ENST00000415522 1221 ntBASIC10.57□□□□□ -0.72
ERCC6Q03468 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC10.57□□□□□ -0.72
ERCC6Q03468 RPS11P7-201ENST00000442125 465 ntBASIC10.57□□□□□ -0.72
ERCC6Q03468 AC100832.1-201ENST00000471945 383 ntBASIC10.57□□□□□ -0.72
ERCC6Q03468 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC10.57□□□□□ -0.72
ERCC6Q03468 MGST2-204ENST00000506797 634 ntTSL 2 BASIC10.57□□□□□ -0.72
ERCC6Q03468 AL049872.1-201ENST00000556323 322 ntBASIC10.57□□□□□ -0.72
ERCC6Q03468 AL357562.1-201ENST00000624911 609 ntBASIC10.57□□□□□ -0.72
ERCC6Q03468 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC10.57□□□□□ -0.72
ERCC6Q03468 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
ERCC6Q03468 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ERCC6Q03468 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC10.57□□□□□ -0.72
ERCC6Q03468 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
ERCC6Q03468 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ERCC6Q03468 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ERCC6Q03468 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
ERCC6Q03468 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ERCC6Q03468 MELK-207ENST00000536860 2342 ntTSL 2 BASIC10.57□□□□□ -0.72
ERCC6Q03468 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
ERCC6Q03468 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ERCC6Q03468 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ERCC6Q03468 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
ERCC6Q03468 SELENOWP1-201ENST00000322792 252 ntBASIC10.56□□□□□ -0.72
ERCC6Q03468 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ERCC6Q03468 RNA5SP350-201ENST00000363298 111 ntBASIC10.56□□□□□ -0.72
ERCC6Q03468 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ERCC6Q03468 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ERCC6Q03468 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC10.56□□□□□ -0.72
ERCC6Q03468 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC10.56□□□□□ -0.72
ERCC6Q03468 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC10.56□□□□□ -0.72
ERCC6Q03468 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC10.56□□□□□ -0.72
ERCC6Q03468 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC10.56□□□□□ -0.72
ERCC6Q03468 AC133644.2-201ENST00000608142 540 ntBASIC10.56□□□□□ -0.72
ERCC6Q03468 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ERCC6Q03468 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC10.56□□□□□ -0.72
ERCC6Q03468 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ERCC6Q03468 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ERCC6Q03468 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
ERCC6Q03468 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ERCC6Q03468 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
ERCC6Q03468 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC10.56□□□□□ -0.72
ERCC6Q03468 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
ERCC6Q03468 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
ERCC6Q03468 OVCH1-201ENST00000318184 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms