Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7□□□□□ -1.29
TPM4P67936 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7□□□□□ -1.29
TPM4P67936 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7□□□□□ -1.29
TPM4P67936 MIR7159-201ENST00000620587 66 ntBASIC7□□□□□ -1.29
TPM4P67936 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7□□□□□ -1.29
TPM4P67936 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7□□□□□ -1.29
TPM4P67936 AL049634.1-201ENST00000453770 1720 ntBASIC7□□□□□ -1.29
TPM4P67936 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TPM4P67936 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7□□□□□ -1.29
TPM4P67936 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
TPM4P67936 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
TPM4P67936 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TPM4P67936 AC087516.1-201ENST00000561236 2428 ntBASIC7□□□□□ -1.29
TPM4P67936 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TPM4P67936 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC7□□□□□ -1.29
TPM4P67936 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TPM4P67936 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
TPM4P67936 AC126474.2-201ENST00000623268 1750 ntBASIC7□□□□□ -1.29
TPM4P67936 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TPM4P67936 AC095038.1-201ENST00000429248 1591 ntBASIC6.99□□□□□ -1.29
TPM4P67936 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TPM4P67936 AP001541.1-201ENST00000623322 1904 ntBASIC6.99□□□□□ -1.29
TPM4P67936 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
TPM4P67936 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TPM4P67936 PPIAP24-201ENST00000328558 471 ntBASIC6.99□□□□□ -1.29
TPM4P67936 AC226101.1-201ENST00000401483 387 ntBASIC6.99□□□□□ -1.29
TPM4P67936 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.99□□□□□ -1.29
TPM4P67936 RPL7AP14-201ENST00000424041 802 ntBASIC6.99□□□□□ -1.29
TPM4P67936 MRPS21P2-201ENST00000424704 264 ntBASIC6.99□□□□□ -1.29
TPM4P67936 RPL12P16-201ENST00000431098 498 ntBASIC6.99□□□□□ -1.29
TPM4P67936 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.99□□□□□ -1.29
TPM4P67936 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.99□□□□□ -1.29
TPM4P67936 CCNJP1-201ENST00000450600 1149 ntBASIC6.99□□□□□ -1.29
TPM4P67936 RAB28P2-201ENST00000454299 641 ntBASIC6.99□□□□□ -1.29
TPM4P67936 AC112187.1-201ENST00000455837 479 ntBASIC6.99□□□□□ -1.29
TPM4P67936 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.99□□□□□ -1.29
TPM4P67936 AC106760.2-201ENST00000504159 619 ntBASIC6.99□□□□□ -1.29
TPM4P67936 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.99□□□□□ -1.29
TPM4P67936 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.99□□□□□ -1.29
TPM4P67936 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.99□□□□□ -1.29
TPM4P67936 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC6.99□□□□□ -1.29
TPM4P67936 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.99□□□□□ -1.29
TPM4P67936 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.99□□□□□ -1.29
TPM4P67936 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.99□□□□□ -1.29
TPM4P67936 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.99□□□□□ -1.29
TPM4P67936 NPM1P5-201ENST00000557228 838 ntBASIC6.99□□□□□ -1.29
TPM4P67936 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.99□□□□□ -1.29
TPM4P67936 AC126323.4-201ENST00000566935 234 ntBASIC6.99□□□□□ -1.29
TPM4P67936 AC091932.1-201ENST00000569381 427 ntBASIC6.99□□□□□ -1.29
TPM4P67936 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.99□□□□□ -1.29
TPM4P67936 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.99□□□□□ -1.29
TPM4P67936 NPIPB1P-202ENST00000588786 828 ntBASIC6.99□□□□□ -1.29
TPM4P67936 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TPM4P67936 AC004890.3-201ENST00000605566 1095 ntBASIC6.99□□□□□ -1.29
TPM4P67936 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TPM4P67936 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
TPM4P67936 AL355480.4-201ENST00000626823 69 ntBASIC6.99□□□□□ -1.29
TPM4P67936 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.99□□□□□ -1.29
TPM4P67936 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TPM4P67936 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.99□□□□□ -1.29
TPM4P67936 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TPM4P67936 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TPM4P67936 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.99□□□□□ -1.29
TPM4P67936 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
TPM4P67936 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.99□□□□□ -1.29
TPM4P67936 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TPM4P67936 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TPM4P67936 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.99□□□□□ -1.29
TPM4P67936 HDAC1P2-201ENST00000453661 1398 ntBASIC6.98□□□□□ -1.29
TPM4P67936 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.98□□□□□ -1.29
TPM4P67936 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TPM4P67936 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.98□□□□□ -1.29
TPM4P67936 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
TPM4P67936 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
TPM4P67936 AL445238.1-204ENST00000400311 463 ntBASIC6.98□□□□□ -1.29
TPM4P67936 SETP22-201ENST00000412243 957 ntBASIC6.98□□□□□ -1.29
TPM4P67936 AC009303.1-201ENST00000426307 352 ntBASIC6.98□□□□□ -1.29
TPM4P67936 CHCHD4P5-201ENST00000436684 427 ntBASIC6.98□□□□□ -1.29
TPM4P67936 AL139135.2-201ENST00000445040 433 ntBASIC6.98□□□□□ -1.29
TPM4P67936 CBX5P1-201ENST00000468470 561 ntBASIC6.98□□□□□ -1.29
TPM4P67936 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.98□□□□□ -1.29
TPM4P67936 MRPL57P6-201ENST00000506570 309 ntBASIC6.98□□□□□ -1.29
TPM4P67936 NF1P12-201ENST00000549593 583 ntBASIC6.98□□□□□ -1.29
TPM4P67936 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
TPM4P67936 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.98□□□□□ -1.29
TPM4P67936 AC023968.1-201ENST00000560719 475 ntBASIC6.98□□□□□ -1.29
TPM4P67936 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.98□□□□□ -1.29
TPM4P67936 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.98□□□□□ -1.29
TPM4P67936 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
TPM4P67936 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
TPM4P67936 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
TPM4P67936 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
TPM4P67936 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
TPM4P67936 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
TPM4P67936 AL121768.1-201ENST00000613917 2544 ntBASIC6.98□□□□□ -1.29
TPM4P67936 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
TPM4P67936 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TPM4P67936 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.97□□□□□ -1.29
TPM4P67936 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.97□□□□□ -1.29
TPM4P67936 NCOA4P2-201ENST00000340589 1813 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms