Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC4.51□□□□□ -1.69
CKS1BP61024 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CKS1BP61024 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
CKS1BP61024 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CKS1BP61024 CREM-203ENST00000344351 1625 ntTSL 2 BASIC4.5□□□□□ -1.69
CKS1BP61024 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CKS1BP61024 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CKS1BP61024 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CKS1BP61024 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
CKS1BP61024 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CKS1BP61024 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CKS1BP61024 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CKS1BP61024 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
CKS1BP61024 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CKS1BP61024 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CKS1BP61024 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CKS1BP61024 RN7SKP118-201ENST00000364331 330 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CKS1BP61024 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CKS1BP61024 SNORD94-201ENST00000386037 137 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 RNA5SP53-201ENST00000391299 120 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 AC233289.1-201ENST00000403700 508 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC4.5□□□□□ -1.69
CKS1BP61024 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC4.5□□□□□ -1.69
CKS1BP61024 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC4.5□□□□□ -1.69
CKS1BP61024 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CKS1BP61024 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC4.5□□□□□ -1.69
CKS1BP61024 Z68868.1-201ENST00000429048 544 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 PAICSP2-201ENST00000429118 1150 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC4.5□□□□□ -1.69
CKS1BP61024 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC4.5□□□□□ -1.69
CKS1BP61024 AL589765.3-201ENST00000446084 462 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 RPLP0P1-201ENST00000457002 361 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 RPL12P24-201ENST00000474907 486 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 AC016559.1-201ENST00000511420 199 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC4.5□□□□□ -1.69
CKS1BP61024 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC4.5□□□□□ -1.69
CKS1BP61024 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC4.5□□□□□ -1.69
CKS1BP61024 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.5□□□□□ -1.69
CKS1BP61024 NATP-201ENST00000523491 878 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC4.5□□□□□ -1.69
CKS1BP61024 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.5□□□□□ -1.69
CKS1BP61024 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC4.5□□□□□ -1.69
CKS1BP61024 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC4.5□□□□□ -1.69
CKS1BP61024 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.5□□□□□ -1.69
CKS1BP61024 NQO1-205ENST00000561500 891 ntTSL 3 BASIC4.5□□□□□ -1.69
CKS1BP61024 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
CKS1BP61024 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CKS1BP61024 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.5□□□□□ -1.69
CKS1BP61024 AP001357.1-201ENST00000586304 1053 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 OR7A11P-201ENST00000597719 953 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC4.5□□□□□ -1.69
CKS1BP61024 5S_rRNA.23-201ENST00000612086 102 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 RN7SL126P-201ENST00000616400 299 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 TCL6_3.1-201ENST00000619064 137 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 AL161420.1-201ENST00000619393 264 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 AL354718.1-201ENST00000619764 589 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 AC005355.2-201ENST00000625064 484 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC4.5□□□□□ -1.69
CKS1BP61024 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC4.5□□□□□ -1.69
CKS1BP61024 AC026108.1-201ENST00000635444 547 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC4.5□□□□□ -1.69
CKS1BP61024 AC097461.1-201ENST00000568928 2821 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CKS1BP61024 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.5□□□□□ -1.69
CKS1BP61024 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CKS1BP61024 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
CKS1BP61024 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CKS1BP61024 Z97989.1-201ENST00000531702 2421 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 STX3-208ENST00000641815 3236 ntBASIC4.5□□□□□ -1.69
CKS1BP61024 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CKS1BP61024 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.49□□□□□ -1.69
CKS1BP61024 AL512353.3-201ENST00000417517 1326 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 AC022613.3-201ENST00000560740 1346 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
CKS1BP61024 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 AC239868.2-201ENST00000564237 4527 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC4.49□□□□□ -1.69
CKS1BP61024 AC027228.2-201ENST00000567141 2154 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CKS1BP61024 RN7SKP69-201ENST00000365390 305 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 SNORA70.5-201ENST00000365519 135 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC4.49□□□□□ -1.69
CKS1BP61024 RNU1-46P-201ENST00000384425 164 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CKS1BP61024 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC4.49□□□□□ -1.69
CKS1BP61024 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms