Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.67□□□□□ -1.18
RHBDL3P58872 MRPL57P1-201ENST00000621486 265 ntBASIC7.67□□□□□ -1.18
RHBDL3P58872 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.67□□□□□ -1.18
RHBDL3P58872 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.67□□□□□ -1.18
RHBDL3P58872 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
RHBDL3P58872 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.67□□□□□ -1.18
RHBDL3P58872 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RHBDL3P58872 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
RHBDL3P58872 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RHBDL3P58872 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
RHBDL3P58872 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RHBDL3P58872 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RHBDL3P58872 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.66□□□□□ -1.18
RHBDL3P58872 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
RHBDL3P58872 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RHBDL3P58872 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
RHBDL3P58872 AL136984.1-201ENST00000607611 1893 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 AC105114.1-201ENST00000624795 1862 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 BX322650.1-201ENST00000332359 2143 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
RHBDL3P58872 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RHBDL3P58872 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.66□□□□□ -1.18
RHBDL3P58872 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RHBDL3P58872 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RHBDL3P58872 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RHBDL3P58872 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
RHBDL3P58872 RN7SKP275-201ENST00000364626 301 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.66□□□□□ -1.18
RHBDL3P58872 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC7.66□□□□□ -1.18
RHBDL3P58872 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.66□□□□□ -1.18
RHBDL3P58872 AC115283.1-201ENST00000427353 400 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 AC069154.1-201ENST00000432914 542 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 AL590004.3-202ENST00000445883 451 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.66□□□□□ -1.18
RHBDL3P58872 AL139156.3-201ENST00000454802 394 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC7.66□□□□□ -1.18
RHBDL3P58872 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RHBDL3P58872 AC022206.1-201ENST00000495947 347 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC7.66□□□□□ -1.18
RHBDL3P58872 AC108103.1-201ENST00000511286 446 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 AC009879.1-201ENST00000520029 839 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 IGHV4-55-201ENST00000520889 368 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC7.66□□□□□ -1.18
RHBDL3P58872 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
RHBDL3P58872 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.66□□□□□ -1.18
RHBDL3P58872 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.66□□□□□ -1.18
RHBDL3P58872 PRELID3BP3-201ENST00000584963 545 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RHBDL3P58872 AC245128.3-201ENST00000594721 748 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.66□□□□□ -1.18
RHBDL3P58872 AC022387.2-201ENST00000604050 448 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 AL359704.2-201ENST00000604335 521 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC7.66□□□□□ -1.18
RHBDL3P58872 AC241377.1-201ENST00000619797 406 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 AC025262.3-201ENST00000623666 360 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.66□□□□□ -1.18
RHBDL3P58872 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.66□□□□□ -1.18
RHBDL3P58872 OR7E91P-202ENST00000642062 1198 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RHBDL3P58872 MROH3P-201ENST00000435735 2676 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.66□□□□□ -1.18
RHBDL3P58872 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.66□□□□□ -1.18
RHBDL3P58872 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RHBDL3P58872 QRSL1P1-201ENST00000400977 1540 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
RHBDL3P58872 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.66□□□□□ -1.18
RHBDL3P58872 AC062022.1-201ENST00000451026 1684 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.66□□□□□ -1.18
RHBDL3P58872 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.66□□□□□ -1.18
RHBDL3P58872 AP003486.1-201ENST00000525716 3994 ntBASIC7.66□□□□□ -1.18
RHBDL3P58872 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC7.66□□□□□ -1.18
RHBDL3P58872 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RHBDL3P58872 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
RHBDL3P58872 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
RHBDL3P58872 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RHBDL3P58872 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RHBDL3P58872 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
RHBDL3P58872 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RHBDL3P58872 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RHBDL3P58872 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.65□□□□□ -1.18
RHBDL3P58872 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.65□□□□□ -1.18
RHBDL3P58872 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
RHBDL3P58872 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RHBDL3P58872 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
RHBDL3P58872 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RHBDL3P58872 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
RHBDL3P58872 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
RHBDL3P58872 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RHBDL3P58872 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
RHBDL3P58872 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.65□□□□□ -1.18
RHBDL3P58872 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RHBDL3P58872 GLS-203ENST00000409215 632 ntTSL 4 BASIC7.65□□□□□ -1.18
RHBDL3P58872 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.65□□□□□ -1.18
RHBDL3P58872 ZNF92P1Y-201ENST00000415010 1191 ntBASIC7.65□□□□□ -1.18
RHBDL3P58872 AL713922.1-201ENST00000416477 747 ntBASIC7.65□□□□□ -1.18
RHBDL3P58872 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RHBDL3P58872 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.65□□□□□ -1.18
RHBDL3P58872 AL157884.1-201ENST00000424561 454 ntBASIC7.65□□□□□ -1.18
RHBDL3P58872 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms