Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC7.4□□□□□ -1.22
NCKAP1LP55160 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
NCKAP1LP55160 AL049874.4-201ENST00000557593 255 ntBASIC7.4□□□□□ -1.22
NCKAP1LP55160 AC091304.4-201ENST00000565703 620 ntBASIC7.4□□□□□ -1.22
NCKAP1LP55160 AC233699.1-201ENST00000569955 1168 ntBASIC7.4□□□□□ -1.22
NCKAP1LP55160 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC7.4□□□□□ -1.22
NCKAP1LP55160 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.4□□□□□ -1.22
NCKAP1LP55160 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.4□□□□□ -1.22
NCKAP1LP55160 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.4□□□□□ -1.22
NCKAP1LP55160 Z94722.1-201ENST00000604328 474 ntBASIC7.4□□□□□ -1.22
NCKAP1LP55160 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.4□□□□□ -1.22
NCKAP1LP55160 AC025171.4-201ENST00000607250 1047 ntBASIC7.4□□□□□ -1.22
NCKAP1LP55160 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC7.4□□□□□ -1.22
NCKAP1LP55160 AL450226.2-201ENST00000622913 439 ntBASIC7.4□□□□□ -1.22
NCKAP1LP55160 AC027559.1-201ENST00000636288 271 ntBASIC7.4□□□□□ -1.22
NCKAP1LP55160 AC093536.2-201ENST00000565257 1406 ntBASIC7.4□□□□□ -1.22
NCKAP1LP55160 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.4□□□□□ -1.22
NCKAP1LP55160 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.4□□□□□ -1.22
NCKAP1LP55160 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.4□□□□□ -1.22
NCKAP1LP55160 AC120338.1-201ENST00000625074 1541 ntBASIC7.4□□□□□ -1.22
NCKAP1LP55160 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
NCKAP1LP55160 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.23
NCKAP1LP55160 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NCKAP1LP55160 AC083806.2-201ENST00000617795 2685 ntBASIC7.4□□□□□ -1.23
NCKAP1LP55160 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
NCKAP1LP55160 MAPK10-323ENST00000641493 3207 ntBASIC7.4□□□□□ -1.23
NCKAP1LP55160 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NCKAP1LP55160 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
NCKAP1LP55160 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NCKAP1LP55160 OR5M2P-202ENST00000641241 4242 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 MAPK10-365ENST00000641902 3825 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NCKAP1LP55160 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NCKAP1LP55160 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NCKAP1LP55160 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NCKAP1LP55160 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NCKAP1LP55160 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 AC004023.1-201ENST00000561473 1744 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 MTCO1P22-201ENST00000604619 1360 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 DDX43P2-201ENST00000604753 1354 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NCKAP1LP55160 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
NCKAP1LP55160 RNA5SP321-201ENST00000362722 111 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 MIR640-201ENST00000385086 96 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 ARSFP1-201ENST00000398758 477 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 AL049545.1-201ENST00000401856 572 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 AL359694.1-201ENST00000403247 604 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 AC068138.1-201ENST00000412635 217 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 AL512504.1-201ENST00000415494 778 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 HIGD1AP15-201ENST00000416198 280 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 CDC42P6-201ENST00000421246 576 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 AC007064.3-201ENST00000422608 359 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 MTCO3P5-201ENST00000433620 714 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 AL645931.1-201ENST00000439737 410 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NCKAP1LP55160 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 AC093827.1-201ENST00000480094 861 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 RN7SKP196-201ENST00000516267 345 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 AC131935.1-201ENST00000524621 333 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 ANP32BP1-202ENST00000568553 737 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 AC106785.4-201ENST00000569492 412 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 AC091133.5-201ENST00000603088 301 ntBASIC7.39□□□□□ -1.23
NCKAP1LP55160 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
NCKAP1LP55160 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NCKAP1LP55160 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NCKAP1LP55160 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
NCKAP1LP55160 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.39□□□□□ -1.23
NCKAP1LP55160 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NCKAP1LP55160 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NCKAP1LP55160 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NCKAP1LP55160 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms