Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.64□□□□□ -1.19
NUP98P52948 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.64□□□□□ -1.19
NUP98P52948 AP005639.1-201ENST00000526939 192 ntBASIC7.64□□□□□ -1.19
NUP98P52948 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.64□□□□□ -1.19
NUP98P52948 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.64□□□□□ -1.19
NUP98P52948 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.64□□□□□ -1.19
NUP98P52948 AC245014.3-201ENST00000618589 347 ntBASIC7.64□□□□□ -1.19
NUP98P52948 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
NUP98P52948 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NUP98P52948 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.64□□□□□ -1.19
NUP98P52948 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.64□□□□□ -1.19
NUP98P52948 AC011815.2-201ENST00000618230 2021 ntBASIC7.64□□□□□ -1.19
NUP98P52948 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC7.64□□□□□ -1.19
NUP98P52948 AL133243.4-201ENST00000623116 3109 ntBASIC7.64□□□□□ -1.19
NUP98P52948 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NUP98P52948 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NUP98P52948 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
NUP98P52948 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NUP98P52948 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
NUP98P52948 RNA5SP478-201ENST00000364657 115 ntBASIC7.64□□□□□ -1.19
NUP98P52948 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.64□□□□□ -1.19
NUP98P52948 RNU11-6P-201ENST00000391127 133 ntBASIC7.64□□□□□ -1.19
NUP98P52948 RPS3AP2-201ENST00000407190 754 ntBASIC7.64□□□□□ -1.19
NUP98P52948 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.64□□□□□ -1.19
NUP98P52948 RPL36P18-201ENST00000419316 318 ntBASIC7.64□□□□□ -1.19
NUP98P52948 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.64□□□□□ -1.19
NUP98P52948 AL512637.1-201ENST00000439523 1231 ntBASIC7.64□□□□□ -1.19
NUP98P52948 AC064862.4-201ENST00000442180 334 ntBASIC7.64□□□□□ -1.19
NUP98P52948 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.64□□□□□ -1.19
NUP98P52948 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.64□□□□□ -1.19
NUP98P52948 RN7SL269P-201ENST00000467795 305 ntBASIC7.64□□□□□ -1.19
NUP98P52948 SLC25A14P1-201ENST00000502867 901 ntBASIC7.64□□□□□ -1.19
NUP98P52948 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.64□□□□□ -1.19
NUP98P52948 AC024451.1-201ENST00000508013 779 ntBASIC7.64□□□□□ -1.19
NUP98P52948 SUMO2P7-201ENST00000511179 285 ntBASIC7.64□□□□□ -1.19
NUP98P52948 RNA5SP400-201ENST00000517155 111 ntBASIC7.64□□□□□ -1.19
NUP98P52948 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.64□□□□□ -1.19
NUP98P52948 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.64□□□□□ -1.19
NUP98P52948 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.64□□□□□ -1.19
NUP98P52948 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
NUP98P52948 AC004477.3-201ENST00000614061 590 ntBASIC7.64□□□□□ -1.19
NUP98P52948 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NUP98P52948 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
NUP98P52948 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.64□□□□□ -1.19
NUP98P52948 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NUP98P52948 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NUP98P52948 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.63□□□□□ -1.19
NUP98P52948 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NUP98P52948 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
NUP98P52948 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.63□□□□□ -1.19
NUP98P52948 AL359976.1-201ENST00000418655 3528 ntBASIC7.63□□□□□ -1.19
NUP98P52948 FO082842.1-201ENST00000423552 1370 ntBASIC7.63□□□□□ -1.19
NUP98P52948 AC092692.1-201ENST00000623625 2595 ntBASIC7.63□□□□□ -1.19
NUP98P52948 AL591848.4-201ENST00000567832 3472 ntBASIC7.63□□□□□ -1.19
NUP98P52948 AC027088.4-201ENST00000611559 1947 ntBASIC7.63□□□□□ -1.19
NUP98P52948 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.63□□□□□ -1.19
NUP98P52948 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.63□□□□□ -1.19
NUP98P52948 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC7.63□□□□□ -1.19
NUP98P52948 SDC4P-201ENST00000453285 601 ntBASIC7.63□□□□□ -1.19
NUP98P52948 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.63□□□□□ -1.19
NUP98P52948 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
NUP98P52948 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.63□□□□□ -1.19
NUP98P52948 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.63□□□□□ -1.19
NUP98P52948 AL136131.3-201ENST00000607600 188 ntBASIC7.63□□□□□ -1.19
NUP98P52948 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.63□□□□□ -1.19
NUP98P52948 RPS2P45-201ENST00000469997 2057 ntBASIC7.63□□□□□ -1.19
NUP98P52948 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.63□□□□□ -1.19
NUP98P52948 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
NUP98P52948 MAPK10-365ENST00000641902 3825 ntBASIC7.62□□□□□ -1.19
NUP98P52948 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC7.62□□□□□ -1.19
NUP98P52948 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NUP98P52948 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
NUP98P52948 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
NUP98P52948 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NUP98P52948 MIR323A-201ENST00000362199 86 ntBASIC7.62□□□□□ -1.19
NUP98P52948 SNORA64.1-201ENST00000362600 132 ntBASIC7.62□□□□□ -1.19
NUP98P52948 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
NUP98P52948 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.62□□□□□ -1.19
NUP98P52948 AC245096.1-201ENST00000413104 546 ntBASIC7.62□□□□□ -1.19
NUP98P52948 UBE2V1P14-201ENST00000415815 558 ntBASIC7.62□□□□□ -1.19
NUP98P52948 AC093155.2-201ENST00000420734 937 ntBASIC7.62□□□□□ -1.19
NUP98P52948 GAPDHP48-201ENST00000436626 961 ntBASIC7.62□□□□□ -1.19
NUP98P52948 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.62□□□□□ -1.19
NUP98P52948 AL157777.1-201ENST00000468100 304 ntBASIC7.62□□□□□ -1.19
NUP98P52948 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.62□□□□□ -1.19
NUP98P52948 AC006530.1-201ENST00000555980 571 ntBASIC7.62□□□□□ -1.19
NUP98P52948 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.62□□□□□ -1.19
NUP98P52948 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.62□□□□□ -1.19
NUP98P52948 AL445649.1-201ENST00000615941 691 ntBASIC7.62□□□□□ -1.19
NUP98P52948 RN7SL544P-201ENST00000617232 284 ntBASIC7.62□□□□□ -1.19
NUP98P52948 RN7SL763P-201ENST00000620922 284 ntBASIC7.62□□□□□ -1.19
NUP98P52948 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.62□□□□□ -1.19
NUP98P52948 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.62□□□□□ -1.19
NUP98P52948 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC7.62□□□□□ -1.19
NUP98P52948 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NUP98P52948 AC096921.2-201ENST00000561507 1916 ntBASIC7.62□□□□□ -1.19
NUP98P52948 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NUP98P52948 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
NUP98P52948 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.62□□□□□ -1.19
NUP98P52948 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms