Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC7.37□□□□□ -1.23
NEDD4P46934 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
NEDD4P46934 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NEDD4P46934 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NEDD4P46934 AC093829.1-201ENST00000506662 1618 ntBASIC7.37□□□□□ -1.23
NEDD4P46934 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
NEDD4P46934 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
NEDD4P46934 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NEDD4P46934 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
NEDD4P46934 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.37□□□□□ -1.23
NEDD4P46934 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
NEDD4P46934 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
NEDD4P46934 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.37□□□□□ -1.23
NEDD4P46934 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
NEDD4P46934 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
NEDD4P46934 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.36□□□□□ -1.23
NEDD4P46934 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NEDD4P46934 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NEDD4P46934 RNU1-65P-201ENST00000363919 148 ntBASIC7.36□□□□□ -1.23
NEDD4P46934 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.36□□□□□ -1.23
NEDD4P46934 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NEDD4P46934 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.36□□□□□ -1.23
NEDD4P46934 RNA5SP431-201ENST00000410312 120 ntBASIC7.36□□□□□ -1.23
NEDD4P46934 RNA5SP251-201ENST00000410614 137 ntBASIC7.36□□□□□ -1.23
NEDD4P46934 RN7SKP161-201ENST00000411110 305 ntBASIC7.36□□□□□ -1.23
NEDD4P46934 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.36□□□□□ -1.23
NEDD4P46934 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.36□□□□□ -1.23
NEDD4P46934 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.36□□□□□ -1.23
NEDD4P46934 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.36□□□□□ -1.23
NEDD4P46934 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NEDD4P46934 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC7.36□□□□□ -1.23
NEDD4P46934 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.36□□□□□ -1.23
NEDD4P46934 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NEDD4P46934 HDAC1P2-201ENST00000453661 1398 ntBASIC7.36□□□□□ -1.23
NEDD4P46934 AC103563.5-201ENST00000455643 364 ntBASIC7.36□□□□□ -1.23
NEDD4P46934 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
NEDD4P46934 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.36□□□□□ -1.23
NEDD4P46934 OR7E99P-201ENST00000505750 922 ntBASIC7.36□□□□□ -1.23
NEDD4P46934 AC010343.2-201ENST00000510162 224 ntBASIC7.36□□□□□ -1.23
NEDD4P46934 Y_RNA.710-201ENST00000516975 110 ntBASIC7.36□□□□□ -1.23
NEDD4P46934 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NEDD4P46934 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NEDD4P46934 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.36□□□□□ -1.23
NEDD4P46934 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
NEDD4P46934 MRPS21P8-201ENST00000569196 235 ntBASIC7.36□□□□□ -1.23
NEDD4P46934 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.36□□□□□ -1.23
NEDD4P46934 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.36□□□□□ -1.23
NEDD4P46934 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.36□□□□□ -1.23
NEDD4P46934 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.36□□□□□ -1.23
NEDD4P46934 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NEDD4P46934 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NEDD4P46934 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
NEDD4P46934 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NEDD4P46934 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
NEDD4P46934 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.35□□□□□ -1.23
NEDD4P46934 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
NEDD4P46934 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NEDD4P46934 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.35□□□□□ -1.23
NEDD4P46934 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NEDD4P46934 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NEDD4P46934 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
NEDD4P46934 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
NEDD4P46934 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
NEDD4P46934 GCNT1P4-201ENST00000404096 329 ntBASIC7.35□□□□□ -1.23
NEDD4P46934 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.35□□□□□ -1.23
NEDD4P46934 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.35□□□□□ -1.23
NEDD4P46934 PPIAP10-201ENST00000438675 458 ntBASIC7.35□□□□□ -1.23
NEDD4P46934 GAPDHP23-201ENST00000444823 993 ntBASIC7.35□□□□□ -1.23
NEDD4P46934 AC021006.1-201ENST00000489849 553 ntBASIC7.35□□□□□ -1.23
NEDD4P46934 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NEDD4P46934 RPL12P7-201ENST00000493832 494 ntBASIC7.35□□□□□ -1.23
NEDD4P46934 HSD3BP3-201ENST00000514706 994 ntBASIC7.35□□□□□ -1.23
NEDD4P46934 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.35□□□□□ -1.23
NEDD4P46934 RPA2P3-201ENST00000533268 770 ntBASIC7.35□□□□□ -1.23
NEDD4P46934 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.35□□□□□ -1.23
NEDD4P46934 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.35□□□□□ -1.23
NEDD4P46934 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.35□□□□□ -1.23
NEDD4P46934 TEX41-271ENST00000628213 993 ntTSL 5 BASIC7.35□□□□□ -1.23
NEDD4P46934 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
NEDD4P46934 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NEDD4P46934 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7.35□□□□□ -1.23
NEDD4P46934 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
NEDD4P46934 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.35□□□□□ -1.23
NEDD4P46934 AC006511.3-201ENST00000624929 1783 ntBASIC7.35□□□□□ -1.23
NEDD4P46934 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.35□□□□□ -1.23
NEDD4P46934 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
NEDD4P46934 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
NEDD4P46934 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NEDD4P46934 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NEDD4P46934 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NEDD4P46934 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
NEDD4P46934 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.34□□□□□ -1.23
NEDD4P46934 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.34□□□□□ -1.23
NEDD4P46934 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.34□□□□□ -1.23
NEDD4P46934 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.34□□□□□ -1.23
NEDD4P46934 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.34□□□□□ -1.23
NEDD4P46934 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
NEDD4P46934 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
NEDD4P46934 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.34□□□□□ -1.23
NEDD4P46934 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms