Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
BRCC3P46736 HIGD1AP16-201ENST00000450986 258 ntBASIC6.73□□□□□ -1.33
BRCC3P46736 AC068228.1-201ENST00000461723 211 ntBASIC6.73□□□□□ -1.33
BRCC3P46736 LDHAP1-201ENST00000509421 992 ntBASIC6.73□□□□□ -1.33
BRCC3P46736 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.73□□□□□ -1.33
BRCC3P46736 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.73□□□□□ -1.33
BRCC3P46736 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.73□□□□□ -1.33
BRCC3P46736 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.73□□□□□ -1.33
BRCC3P46736 CYCSP38-201ENST00000559840 322 ntBASIC6.73□□□□□ -1.33
BRCC3P46736 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.73□□□□□ -1.33
BRCC3P46736 MIR5095-201ENST00000578844 88 ntBASIC6.73□□□□□ -1.33
BRCC3P46736 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.73□□□□□ -1.33
BRCC3P46736 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.73□□□□□ -1.33
BRCC3P46736 AL049840.6-202ENST00000603373 279 ntBASIC6.73□□□□□ -1.33
BRCC3P46736 AC073333.2-201ENST00000603589 769 ntBASIC6.73□□□□□ -1.33
BRCC3P46736 AL591167.1-201ENST00000607321 456 ntBASIC6.73□□□□□ -1.33
BRCC3P46736 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.73□□□□□ -1.33
BRCC3P46736 AC073389.3-201ENST00000609434 935 ntBASIC6.73□□□□□ -1.33
BRCC3P46736 AC010998.3-201ENST00000613871 631 ntBASIC6.73□□□□□ -1.33
BRCC3P46736 AC087269.2-201ENST00000641764 975 ntBASIC6.73□□□□□ -1.33
BRCC3P46736 BRD7P1-201ENST00000557705 1915 ntBASIC6.73□□□□□ -1.33
BRCC3P46736 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
BRCC3P46736 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.73□□□□□ -1.33
BRCC3P46736 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.73□□□□□ -1.33
BRCC3P46736 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
BRCC3P46736 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.73□□□□□ -1.33
BRCC3P46736 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
BRCC3P46736 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
BRCC3P46736 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.72□□□□□ -1.33
BRCC3P46736 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.72□□□□□ -1.33
BRCC3P46736 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.72□□□□□ -1.33
BRCC3P46736 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
BRCC3P46736 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
BRCC3P46736 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
BRCC3P46736 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
BRCC3P46736 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
BRCC3P46736 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
BRCC3P46736 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
BRCC3P46736 AL157831.2-201ENST00000564681 3095 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
BRCC3P46736 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
BRCC3P46736 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
BRCC3P46736 RNA5SP188-201ENST00000362916 129 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 MIR130B-202ENST00000385018 82 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 RN7SKP144-201ENST00000411108 279 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.72□□□□□ -1.33
BRCC3P46736 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
BRCC3P46736 AC097463.1-201ENST00000447288 481 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.72□□□□□ -1.33
BRCC3P46736 MTND6P8-201ENST00000503471 522 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 AL158068.1-201ENST00000506116 616 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 SUMO2P7-201ENST00000511179 285 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.72□□□□□ -1.33
BRCC3P46736 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
BRCC3P46736 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
BRCC3P46736 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.72□□□□□ -1.33
BRCC3P46736 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.72□□□□□ -1.33
BRCC3P46736 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.72□□□□□ -1.33
BRCC3P46736 AL138895.2-201ENST00000603019 178 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 AC097467.4-201ENST00000605504 141 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 AC092681.3-201ENST00000609463 678 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 AC092266.1-201ENST00000610958 165 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 AC004801.6-201ENST00000616571 978 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 RFPL4AP6-201ENST00000616792 846 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 MIR7159-201ENST00000620587 66 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 AC022400.9-201ENST00000623633 273 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
BRCC3P46736 CDY10P-201ENST00000452415 1567 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.72□□□□□ -1.33
BRCC3P46736 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
BRCC3P46736 AC006213.6-201ENST00000623722 4179 ntBASIC6.72□□□□□ -1.33
BRCC3P46736 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
BRCC3P46736 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.72□□□□□ -1.33
BRCC3P46736 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.72□□□□□ -1.33
BRCC3P46736 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.72□□□□□ -1.33
BRCC3P46736 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
BRCC3P46736 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
BRCC3P46736 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
BRCC3P46736 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
BRCC3P46736 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.72□□□□□ -1.33
BRCC3P46736 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
BRCC3P46736 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
BRCC3P46736 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
BRCC3P46736 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
BRCC3P46736 AC013488.1-201ENST00000526618 1838 ntBASIC6.71□□□□□ -1.33
BRCC3P46736 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
BRCC3P46736 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.71□□□□□ -1.33
BRCC3P46736 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.71□□□□□ -1.33
BRCC3P46736 LPAL2-203ENST00000454031 2498 ntBASIC6.71□□□□□ -1.33
BRCC3P46736 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
BRCC3P46736 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
BRCC3P46736 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.33
BRCC3P46736 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
BRCC3P46736 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
BRCC3P46736 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.71□□□□□ -1.34
BRCC3P46736 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
BRCC3P46736 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
BRCC3P46736 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms