Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFC3P40938 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFC3P40938 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFC3P40938 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFC3P40938 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFC3P40938 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC5.93□□□□□ -1.46
RFC3P40938 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RFC3P40938 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RFC3P40938 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
RFC3P40938 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.93□□□□□ -1.46
RFC3P40938 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RFC3P40938 NCOA4P2-201ENST00000340589 1813 ntBASIC5.93□□□□□ -1.46
RFC3P40938 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.93□□□□□ -1.46
RFC3P40938 AC009779.8-201ENST00000641684 4384 ntBASIC5.93□□□□□ -1.46
RFC3P40938 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RFC3P40938 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RFC3P40938 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RFC3P40938 AL391419.1-201ENST00000398901 1275 ntBASIC5.93□□□□□ -1.46
RFC3P40938 OR7E156P-201ENST00000400303 464 ntBASIC5.93□□□□□ -1.46
RFC3P40938 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RFC3P40938 MTND2P12-201ENST00000417560 1252 ntBASIC5.93□□□□□ -1.46
RFC3P40938 RPL5P10-201ENST00000445207 894 ntBASIC5.93□□□□□ -1.46
RFC3P40938 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.93□□□□□ -1.46
RFC3P40938 CTSLP6-201ENST00000458273 1002 ntBASIC5.93□□□□□ -1.46
RFC3P40938 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
RFC3P40938 AC018797.1-201ENST00000510791 255 ntBASIC5.93□□□□□ -1.46
RFC3P40938 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.93□□□□□ -1.46
RFC3P40938 SCARNA5-201ENST00000516201 276 ntBASIC5.93□□□□□ -1.46
RFC3P40938 AL133399.1-201ENST00000527476 298 ntBASIC5.93□□□□□ -1.46
RFC3P40938 AC005363.1-201ENST00000530779 351 ntBASIC5.93□□□□□ -1.46
RFC3P40938 AL162632.2-201ENST00000553933 399 ntBASIC5.93□□□□□ -1.46
RFC3P40938 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.93□□□□□ -1.46
RFC3P40938 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
RFC3P40938 AL078601.3-201ENST00000573303 535 ntBASIC5.93□□□□□ -1.46
RFC3P40938 AC004232.2-201ENST00000574245 821 ntBASIC5.93□□□□□ -1.46
RFC3P40938 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.93□□□□□ -1.46
RFC3P40938 AC137695.1-201ENST00000604126 489 ntBASIC5.93□□□□□ -1.46
RFC3P40938 AL499605.1-201ENST00000604628 403 ntBASIC5.93□□□□□ -1.46
RFC3P40938 AC009237.12-201ENST00000604755 742 ntBASIC5.93□□□□□ -1.46
RFC3P40938 AL135999.3-201ENST00000610501 812 ntBASIC5.93□□□□□ -1.46
RFC3P40938 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.93□□□□□ -1.46
RFC3P40938 CASC19-274ENST00000642018 970 ntBASIC5.93□□□□□ -1.46
RFC3P40938 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.93□□□□□ -1.46
RFC3P40938 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RFC3P40938 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RFC3P40938 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RFC3P40938 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RFC3P40938 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.93□□□□□ -1.46
RFC3P40938 NEK2P4-201ENST00000425793 1329 ntBASIC5.93□□□□□ -1.46
RFC3P40938 AL512310.3-201ENST00000547023 1335 ntBASIC5.93□□□□□ -1.46
RFC3P40938 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RFC3P40938 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RFC3P40938 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RFC3P40938 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RFC3P40938 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RFC3P40938 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RFC3P40938 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.92□□□□□ -1.46
RFC3P40938 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFC3P40938 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RFC3P40938 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC5.92□□□□□ -1.46
RFC3P40938 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
RFC3P40938 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RFC3P40938 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RFC3P40938 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.92□□□□□ -1.46
RFC3P40938 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFC3P40938 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RFC3P40938 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RFC3P40938 YWHAZP6-201ENST00000399764 738 ntBASIC5.92□□□□□ -1.46
RFC3P40938 AL359092.1-201ENST00000417156 265 ntBASIC5.92□□□□□ -1.46
RFC3P40938 NME1P1-201ENST00000420914 382 ntBASIC5.92□□□□□ -1.46
RFC3P40938 AC115283.1-201ENST00000427353 400 ntBASIC5.92□□□□□ -1.46
RFC3P40938 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.92□□□□□ -1.46
RFC3P40938 DNAJC19P5-201ENST00000443295 316 ntBASIC5.92□□□□□ -1.46
RFC3P40938 AC068491.1-201ENST00000449539 1241 ntBASIC5.92□□□□□ -1.46
RFC3P40938 RN7SL561P-201ENST00000488553 281 ntBASIC5.92□□□□□ -1.46
RFC3P40938 AC022206.1-201ENST00000495947 347 ntBASIC5.92□□□□□ -1.46
RFC3P40938 H3F3AP3-201ENST00000497682 407 ntBASIC5.92□□□□□ -1.46
RFC3P40938 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.92□□□□□ -1.46
RFC3P40938 AC084121.1-201ENST00000533882 835 ntBASIC5.92□□□□□ -1.46
RFC3P40938 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.92□□□□□ -1.46
RFC3P40938 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.92□□□□□ -1.46
RFC3P40938 MIR4502-201ENST00000580432 81 ntBASIC5.92□□□□□ -1.46
RFC3P40938 AC134669.1-201ENST00000581275 672 ntBASIC5.92□□□□□ -1.46
RFC3P40938 MIR4420-201ENST00000583944 77 ntBASIC5.92□□□□□ -1.46
RFC3P40938 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RFC3P40938 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RFC3P40938 OR7A8P-201ENST00000595427 913 ntBASIC5.92□□□□□ -1.46
RFC3P40938 BUB1P1-201ENST00000603541 607 ntBASIC5.92□□□□□ -1.46
RFC3P40938 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.92□□□□□ -1.46
RFC3P40938 uc_338.31-201ENST00000615595 186 ntBASIC5.92□□□□□ -1.46
RFC3P40938 AL031658.2-201ENST00000616850 651 ntBASIC5.92□□□□□ -1.46
RFC3P40938 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.92□□□□□ -1.46
RFC3P40938 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.92□□□□□ -1.46
RFC3P40938 LINC02495-203ENST00000636704 242 ntBASIC5.92□□□□□ -1.46
RFC3P40938 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.92□□□□□ -1.46
RFC3P40938 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFC3P40938 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.92□□□□□ -1.46
RFC3P40938 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.92□□□□□ -1.46
RFC3P40938 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
RFC3P40938 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms