Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
FDFT1P37268 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.44□□□□□ -1.38
FDFT1P37268 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
FDFT1P37268 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.44□□□□□ -1.38
FDFT1P37268 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
FDFT1P37268 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.44□□□□□ -1.38
FDFT1P37268 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FDFT1P37268 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FDFT1P37268 AL136984.1-201ENST00000607611 1893 ntBASIC6.43□□□□□ -1.38
FDFT1P37268 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
FDFT1P37268 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
FDFT1P37268 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FDFT1P37268 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
FDFT1P37268 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FDFT1P37268 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.43□□□□□ -1.38
FDFT1P37268 RN7SKP129-201ENST00000410288 299 ntBASIC6.43□□□□□ -1.38
FDFT1P37268 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.43□□□□□ -1.38
FDFT1P37268 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.43□□□□□ -1.38
FDFT1P37268 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.43□□□□□ -1.38
FDFT1P37268 NPM1P23-201ENST00000440193 849 ntBASIC6.43□□□□□ -1.38
FDFT1P37268 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.43□□□□□ -1.38
FDFT1P37268 AC234771.4-201ENST00000441416 730 ntBASIC6.43□□□□□ -1.38
FDFT1P37268 HMGN1P32-201ENST00000441744 256 ntBASIC6.43□□□□□ -1.38
FDFT1P37268 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.43□□□□□ -1.38
FDFT1P37268 RPL31P11-202ENST00000454082 372 ntBASIC6.43□□□□□ -1.38
FDFT1P37268 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.43□□□□□ -1.38
FDFT1P37268 RPL7L1P3-201ENST00000455249 689 ntBASIC6.43□□□□□ -1.38
FDFT1P37268 RN7SL643P-201ENST00000471845 291 ntBASIC6.43□□□□□ -1.38
FDFT1P37268 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.43□□□□□ -1.38
FDFT1P37268 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.43□□□□□ -1.38
FDFT1P37268 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.43□□□□□ -1.38
FDFT1P37268 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.43□□□□□ -1.38
FDFT1P37268 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.43□□□□□ -1.38
FDFT1P37268 AC005332.4-201ENST00000592752 579 ntBASIC6.43□□□□□ -1.38
FDFT1P37268 AL589863.1-201ENST00000595383 631 ntBASIC6.43□□□□□ -1.38
FDFT1P37268 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.43□□□□□ -1.38
FDFT1P37268 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FDFT1P37268 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FDFT1P37268 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
FDFT1P37268 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.43□□□□□ -1.38
FDFT1P37268 CCNT2P1-201ENST00000423082 1315 ntBASIC6.43□□□□□ -1.38
FDFT1P37268 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FDFT1P37268 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
FDFT1P37268 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.43□□□□□ -1.38
FDFT1P37268 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FDFT1P37268 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
FDFT1P37268 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
FDFT1P37268 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.42□□□□□ -1.38
FDFT1P37268 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
FDFT1P37268 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
FDFT1P37268 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
FDFT1P37268 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
FDFT1P37268 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
FDFT1P37268 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
FDFT1P37268 USP9YP3-201ENST00000434481 1766 ntBASIC6.42□□□□□ -1.38
FDFT1P37268 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.42□□□□□ -1.38
FDFT1P37268 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
FDFT1P37268 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.42□□□□□ -1.38
FDFT1P37268 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
FDFT1P37268 MIR1266-201ENST00000408125 84 ntBASIC6.42□□□□□ -1.38
FDFT1P37268 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.42□□□□□ -1.38
FDFT1P37268 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.42□□□□□ -1.38
FDFT1P37268 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.42□□□□□ -1.38
FDFT1P37268 MORF4-201ENST00000447135 971 ntBASIC6.42□□□□□ -1.38
FDFT1P37268 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
FDFT1P37268 AP003385.3-201ENST00000472498 287 ntBASIC6.42□□□□□ -1.38
FDFT1P37268 RN7SL790P-201ENST00000474043 298 ntBASIC6.42□□□□□ -1.38
FDFT1P37268 RPS7P11-201ENST00000484240 586 ntBASIC6.42□□□□□ -1.38
FDFT1P37268 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.42□□□□□ -1.38
FDFT1P37268 RPA2P3-201ENST00000533268 770 ntBASIC6.42□□□□□ -1.38
FDFT1P37268 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.42□□□□□ -1.38
FDFT1P37268 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.42□□□□□ -1.38
FDFT1P37268 AC007494.1-201ENST00000562293 760 ntBASIC6.42□□□□□ -1.38
FDFT1P37268 AC090651.1-201ENST00000567865 634 ntBASIC6.42□□□□□ -1.38
FDFT1P37268 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.42□□□□□ -1.38
FDFT1P37268 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
FDFT1P37268 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.42□□□□□ -1.38
FDFT1P37268 MIR4420-201ENST00000583944 77 ntBASIC6.42□□□□□ -1.38
FDFT1P37268 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.42□□□□□ -1.38
FDFT1P37268 NPIPB1P-202ENST00000588786 828 ntBASIC6.42□□□□□ -1.38
FDFT1P37268 AC036176.3-201ENST00000602456 418 ntBASIC6.42□□□□□ -1.38
FDFT1P37268 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.42□□□□□ -1.38
FDFT1P37268 SNORA74.4-201ENST00000607595 199 ntBASIC6.42□□□□□ -1.38
FDFT1P37268 AC068213.1-201ENST00000625124 226 ntBASIC6.42□□□□□ -1.38
FDFT1P37268 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
FDFT1P37268 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.42□□□□□ -1.38
FDFT1P37268 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
FDFT1P37268 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.42□□□□□ -1.38
FDFT1P37268 AC096921.2-201ENST00000561507 1916 ntBASIC6.42□□□□□ -1.38
FDFT1P37268 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.42□□□□□ -1.38
FDFT1P37268 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
FDFT1P37268 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
FDFT1P37268 MTND5P12-201ENST00000502851 1449 ntBASIC6.42□□□□□ -1.38
FDFT1P37268 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
FDFT1P37268 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
FDFT1P37268 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
FDFT1P37268 AC079753.1-201ENST00000623243 3868 ntBASIC6.41□□□□□ -1.38
FDFT1P37268 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
FDFT1P37268 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.41□□□□□ -1.38
FDFT1P37268 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms