Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 CASC19-246ENST00000641625 1606 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM23P36406 AC073365.1-203ENST00000641055 1992 ntBASIC6.38□□□□□ -1.39
TRIM23P36406 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
TRIM23P36406 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM23P36406 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM23P36406 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM23P36406 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM23P36406 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
TRIM23P36406 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM23P36406 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM23P36406 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM23P36406 AKAP17BP-201ENST00000431706 2719 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM23P36406 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM23P36406 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM23P36406 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM23P36406 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM23P36406 FO082842.1-201ENST00000423552 1370 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM23P36406 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
TRIM23P36406 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM23P36406 OOSP1-201ENST00000398992 1270 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 NPM1P38-201ENST00000403835 865 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 OR2W4P-201ENST00000406496 926 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 AL023284.3-201ENST00000407767 334 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 AL139805.1-201ENST00000407837 289 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 MIR1275-201ENST00000408770 80 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 GAPDHP59-201ENST00000435908 267 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM23P36406 PMS2P9-201ENST00000441237 515 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM23P36406 REG1CP-206ENST00000447469 496 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM23P36406 CTSLP6-201ENST00000458273 1002 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 RN7SL643P-201ENST00000471845 291 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 CR383656.1-201ENST00000484916 377 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 AC022206.1-201ENST00000495947 347 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 AC113367.2-201ENST00000505749 160 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 AC112484.3-201ENST00000505910 329 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM23P36406 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 Vault.2-201ENST00000516519 98 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM23P36406 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM23P36406 IGLV3-6-201ENST00000523937 250 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM23P36406 AC009729.1-201ENST00000548873 1133 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM23P36406 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM23P36406 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM23P36406 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM23P36406 MIR3154-201ENST00000577829 84 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 MIR4271-201ENST00000582451 67 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 RN7SL475P-201ENST00000583379 298 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 AC090616.1-201ENST00000583895 447 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM23P36406 MIR6721-201ENST00000617181 87 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 AC021422.1-201ENST00000621212 473 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 AL109924.4-201ENST00000623089 670 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 AC012254.5-201ENST00000623573 478 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TRIM23P36406 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM23P36406 AC083837.1-201ENST00000565297 2994 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM23P36406 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM23P36406 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM23P36406 GTF2IP4-201ENST00000453092 2054 ntBASIC6.37□□□□□ -1.39
TRIM23P36406 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM23P36406 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM23P36406 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
TRIM23P36406 AL078595.2-201ENST00000605309 1780 ntBASIC6.36□□□□□ -1.39
TRIM23P36406 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
TRIM23P36406 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
TRIM23P36406 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
TRIM23P36406 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM23P36406 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM23P36406 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
TRIM23P36406 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM23P36406 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM23P36406 AC125238.2-201ENST00000430003 1440 ntBASIC6.36□□□□□ -1.39
TRIM23P36406 AC011455.2-201ENST00000599320 3336 ntBASIC6.36□□□□□ -1.39
TRIM23P36406 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM23P36406 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM23P36406 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM23P36406 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM23P36406 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM23P36406 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM23P36406 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM23P36406 RPL11P4-201ENST00000332269 436 ntBASIC6.36□□□□□ -1.39
TRIM23P36406 SNORD16-201ENST00000362803 99 ntBASIC6.36□□□□□ -1.39
TRIM23P36406 RNA5SP188-201ENST00000362916 129 ntBASIC6.36□□□□□ -1.39
TRIM23P36406 MIR188-201ENST00000385034 86 ntBASIC6.36□□□□□ -1.39
TRIM23P36406 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM23P36406 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM23P36406 AL354893.1-201ENST00000433735 348 ntBASIC6.36□□□□□ -1.39
TRIM23P36406 EMC3-AS1-205ENST00000438698 534 ntBASIC6.36□□□□□ -1.39
TRIM23P36406 RPSAP40-201ENST00000442343 891 ntBASIC6.36□□□□□ -1.39
TRIM23P36406 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM23P36406 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms