Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
HOXD13P35453 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
HOXD13P35453 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HOXD13P35453 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HOXD13P35453 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.92□□□□□ -1.3
HOXD13P35453 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.92□□□□□ -1.3
HOXD13P35453 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HOXD13P35453 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HOXD13P35453 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HOXD13P35453 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
HOXD13P35453 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HOXD13P35453 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
HOXD13P35453 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HOXD13P35453 AL353763.1-201ENST00000624467 1628 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HOXD13P35453 AOX3P-204ENST00000491025 2107 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 AC078880.4-201ENST00000617627 1749 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HOXD13P35453 RNA5SP485-201ENST00000365053 119 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HOXD13P35453 TMA16P2-201ENST00000413187 601 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 AC007568.1-201ENST00000422912 471 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 AC094019.1-201ENST00000434678 472 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.91□□□□□ -1.3
HOXD13P35453 AL356121.1-201ENST00000442911 156 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.91□□□□□ -1.3
HOXD13P35453 KF459542.1-201ENST00000450908 553 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 AL133351.3-201ENST00000454998 193 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 AC103563.5-201ENST00000455643 364 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 OR4D12P-201ENST00000509361 911 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 SNORA74.1-201ENST00000516320 180 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.91□□□□□ -1.3
HOXD13P35453 AC036111.2-201ENST00000533247 901 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 BTG1P1-201ENST00000540396 508 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.91□□□□□ -1.3
HOXD13P35453 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.91□□□□□ -1.3
HOXD13P35453 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.91□□□□□ -1.3
HOXD13P35453 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.91□□□□□ -1.3
HOXD13P35453 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.91□□□□□ -1.3
HOXD13P35453 AC012676.3-201ENST00000614983 479 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.91□□□□□ -1.3
HOXD13P35453 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
HOXD13P35453 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HOXD13P35453 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HOXD13P35453 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HOXD13P35453 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HOXD13P35453 AP001541.1-201ENST00000623322 1904 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.91□□□□□ -1.3
HOXD13P35453 SMG1P5-202ENST00000529428 4219 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 SMG1P2-201ENST00000566127 4221 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 AC092692.1-201ENST00000623625 2595 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 AC018717.1-201ENST00000457712 1505 ntBASIC6.91□□□□□ -1.3
HOXD13P35453 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.91□□□□□ -1.3
HOXD13P35453 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HOXD13P35453 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.91□□□□□ -1.3
HOXD13P35453 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD13P35453 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD13P35453 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD13P35453 AC006511.3-201ENST00000624929 1783 ntBASIC6.9□□□□□ -1.3
HOXD13P35453 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.9□□□□□ -1.3
HOXD13P35453 YWHAZP4-201ENST00000392459 708 ntBASIC6.9□□□□□ -1.3
HOXD13P35453 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.9□□□□□ -1.3
HOXD13P35453 AL034417.1-201ENST00000399343 800 ntBASIC6.9□□□□□ -1.3
HOXD13P35453 RN7SKP146-201ENST00000410242 334 ntBASIC6.9□□□□□ -1.3
HOXD13P35453 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD13P35453 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.9□□□□□ -1.3
HOXD13P35453 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.9□□□□□ -1.3
HOXD13P35453 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.9□□□□□ -1.3
HOXD13P35453 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.9□□□□□ -1.3
HOXD13P35453 SOCS5P1-201ENST00000440415 949 ntBASIC6.9□□□□□ -1.3
HOXD13P35453 MORF4-201ENST00000447135 971 ntBASIC6.9□□□□□ -1.3
HOXD13P35453 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD13P35453 OR2A3P-201ENST00000493774 953 ntBASIC6.9□□□□□ -1.3
HOXD13P35453 RN7SL612P-201ENST00000497704 295 ntBASIC6.9□□□□□ -1.3
HOXD13P35453 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.9□□□□□ -1.3
HOXD13P35453 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.9□□□□□ -1.3
HOXD13P35453 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD13P35453 RNA5SP116-201ENST00000516132 98 ntBASIC6.9□□□□□ -1.3
HOXD13P35453 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.9□□□□□ -1.3
HOXD13P35453 AP001858.2-201ENST00000536213 601 ntBASIC6.9□□□□□ -1.3
HOXD13P35453 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.9□□□□□ -1.3
HOXD13P35453 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.9□□□□□ -1.3
HOXD13P35453 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.9□□□□□ -1.3
HOXD13P35453 AC006924.1-201ENST00000610750 559 ntBASIC6.9□□□□□ -1.3
HOXD13P35453 MIR7159-201ENST00000620587 66 ntBASIC6.9□□□□□ -1.3
HOXD13P35453 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.9□□□□□ -1.3
HOXD13P35453 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.3
HOXD13P35453 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
HOXD13P35453 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
HOXD13P35453 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
HOXD13P35453 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.9□□□□□ -1.31
HOXD13P35453 CCDC162P-202ENST00000368966 6751 ntBASIC6.9□□□□□ -1.31
HOXD13P35453 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.9□□□□□ -1.31
HOXD13P35453 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
HOXD13P35453 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HOXD13P35453 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
HOXD13P35453 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HOXD13P35453 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.9□□□□□ -1.31
HOXD13P35453 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.9□□□□□ -1.31
HOXD13P35453 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms