Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXA13P31271 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXA13P31271 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
HOXA13P31271 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXA13P31271 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
HOXA13P31271 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXA13P31271 AC092967.1-201ENST00000449016 481 ntBASIC7.17□□□□□ -1.26
HOXA13P31271 VN1R38P-201ENST00000450265 887 ntBASIC7.17□□□□□ -1.26
HOXA13P31271 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXA13P31271 AC009120.3-201ENST00000563335 499 ntBASIC7.17□□□□□ -1.26
HOXA13P31271 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXA13P31271 AC137695.1-201ENST00000604126 489 ntBASIC7.17□□□□□ -1.26
HOXA13P31271 AL591167.1-201ENST00000607321 456 ntBASIC7.17□□□□□ -1.26
HOXA13P31271 AC010998.3-201ENST00000613871 631 ntBASIC7.17□□□□□ -1.26
HOXA13P31271 RFPL4AP6-201ENST00000616792 846 ntBASIC7.17□□□□□ -1.26
HOXA13P31271 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.17□□□□□ -1.26
HOXA13P31271 MIR6778-201ENST00000617912 73 ntBASIC7.17□□□□□ -1.26
HOXA13P31271 AC010809.3-201ENST00000621310 641 ntBASIC7.17□□□□□ -1.26
HOXA13P31271 AL359742.1-201ENST00000622497 540 ntBASIC7.17□□□□□ -1.26
HOXA13P31271 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXA13P31271 MIR1910-201ENST00000636955 80 ntBASIC7.17□□□□□ -1.26
HOXA13P31271 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXA13P31271 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXA13P31271 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
HOXA13P31271 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
HOXA13P31271 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXA13P31271 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXA13P31271 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXA13P31271 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
HOXA13P31271 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
HOXA13P31271 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
HOXA13P31271 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA13P31271 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
HOXA13P31271 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA13P31271 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA13P31271 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
HOXA13P31271 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA13P31271 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
HOXA13P31271 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.16□□□□□ -1.26
HOXA13P31271 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
HOXA13P31271 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA13P31271 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
HOXA13P31271 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
HOXA13P31271 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA13P31271 RNA5SP478-201ENST00000364657 115 ntBASIC7.16□□□□□ -1.26
HOXA13P31271 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.16□□□□□ -1.26
HOXA13P31271 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
HOXA13P31271 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
HOXA13P31271 RN7SKP144-201ENST00000411108 279 ntBASIC7.16□□□□□ -1.26
HOXA13P31271 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.16□□□□□ -1.26
HOXA13P31271 AC097721.1-201ENST00000427150 1253 ntBASIC7.16□□□□□ -1.26
HOXA13P31271 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.16□□□□□ -1.26
HOXA13P31271 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.16□□□□□ -1.26
HOXA13P31271 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC7.16□□□□□ -1.26
HOXA13P31271 AC023141.3-201ENST00000436698 278 ntBASIC7.16□□□□□ -1.26
HOXA13P31271 HMGN1P2-201ENST00000445197 310 ntBASIC7.16□□□□□ -1.26
HOXA13P31271 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.16□□□□□ -1.26
HOXA13P31271 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.16□□□□□ -1.26
HOXA13P31271 MTND6P8-201ENST00000503471 522 ntBASIC7.16□□□□□ -1.26
HOXA13P31271 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.16□□□□□ -1.26
HOXA13P31271 Y_RNA.710-201ENST00000516975 110 ntBASIC7.16□□□□□ -1.26
HOXA13P31271 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC7.16□□□□□ -1.26
HOXA13P31271 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.16□□□□□ -1.26
HOXA13P31271 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.16□□□□□ -1.26
HOXA13P31271 AC007346.1-201ENST00000569208 867 ntBASIC7.16□□□□□ -1.26
HOXA13P31271 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.16□□□□□ -1.26
HOXA13P31271 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA13P31271 AC073333.2-201ENST00000603589 769 ntBASIC7.16□□□□□ -1.26
HOXA13P31271 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.16□□□□□ -1.26
HOXA13P31271 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
HOXA13P31271 AC012254.5-201ENST00000623573 478 ntBASIC7.16□□□□□ -1.26
HOXA13P31271 IPO5-229ENST00000631030 192 ntTSL 5 BASIC7.16□□□□□ -1.26
HOXA13P31271 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.16□□□□□ -1.26
HOXA13P31271 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA13P31271 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.16□□□□□ -1.26
HOXA13P31271 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.16□□□□□ -1.26
HOXA13P31271 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.16□□□□□ -1.26
HOXA13P31271 AL354854.1-201ENST00000455940 1363 ntBASIC7.16□□□□□ -1.26
HOXA13P31271 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
HOXA13P31271 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA13P31271 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
HOXA13P31271 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA13P31271 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA13P31271 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC7.16□□□□□ -1.26
HOXA13P31271 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
HOXA13P31271 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA13P31271 MAPK10-287ENST00000641217 3037 ntBASIC7.16□□□□□ -1.26
HOXA13P31271 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXA13P31271 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.16□□□□□ -1.26
HOXA13P31271 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HOXA13P31271 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HOXA13P31271 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.15□□□□□ -1.26
HOXA13P31271 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HOXA13P31271 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
HOXA13P31271 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.15□□□□□ -1.26
HOXA13P31271 AC089998.1-201ENST00000548575 3141 ntBASIC7.15□□□□□ -1.26
HOXA13P31271 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.15□□□□□ -1.26
HOXA13P31271 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
HOXA13P31271 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HOXA13P31271 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms