Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 IGKV1D-22-201ENST00000518953 324 ntBASIC7.46□□□□□ -1.22
SMARCA1P28370 AC116917.1-201ENST00000520558 305 ntBASIC7.46□□□□□ -1.22
SMARCA1P28370 IGHV4-55-201ENST00000520889 368 ntBASIC7.46□□□□□ -1.22
SMARCA1P28370 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
SMARCA1P28370 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
SMARCA1P28370 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.46□□□□□ -1.22
SMARCA1P28370 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC7.46□□□□□ -1.22
SMARCA1P28370 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SMARCA1P28370 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.46□□□□□ -1.22
SMARCA1P28370 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SMARCA1P28370 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.46□□□□□ -1.22
SMARCA1P28370 AC011500.1-201ENST00000601963 469 ntBASIC7.46□□□□□ -1.22
SMARCA1P28370 AC073046.2-201ENST00000604756 527 ntBASIC7.46□□□□□ -1.22
SMARCA1P28370 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.46□□□□□ -1.22
SMARCA1P28370 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.46□□□□□ -1.22
SMARCA1P28370 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SMARCA1P28370 AC012254.5-201ENST00000623573 478 ntBASIC7.46□□□□□ -1.22
SMARCA1P28370 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
SMARCA1P28370 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SMARCA1P28370 CYP2G2P-201ENST00000594920 1485 ntBASIC7.46□□□□□ -1.22
SMARCA1P28370 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SMARCA1P28370 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SMARCA1P28370 AC110373.1-201ENST00000505994 3505 ntBASIC7.46□□□□□ -1.22
SMARCA1P28370 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SMARCA1P28370 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SMARCA1P28370 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SMARCA1P28370 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.46□□□□□ -1.22
SMARCA1P28370 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.46□□□□□ -1.22
SMARCA1P28370 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.46□□□□□ -1.22
SMARCA1P28370 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SMARCA1P28370 AC110597.1-201ENST00000562669 3176 ntBASIC7.46□□□□□ -1.22
SMARCA1P28370 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.46□□□□□ -1.22
SMARCA1P28370 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SMARCA1P28370 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
SMARCA1P28370 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
SMARCA1P28370 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.46□□□□□ -1.22
SMARCA1P28370 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.45□□□□□ -1.22
SMARCA1P28370 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMARCA1P28370 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMARCA1P28370 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.45□□□□□ -1.22
SMARCA1P28370 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMARCA1P28370 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMARCA1P28370 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMARCA1P28370 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.45□□□□□ -1.22
SMARCA1P28370 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SMARCA1P28370 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SMARCA1P28370 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMARCA1P28370 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
SMARCA1P28370 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
SMARCA1P28370 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SMARCA1P28370 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.45□□□□□ -1.22
SMARCA1P28370 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.45□□□□□ -1.22
SMARCA1P28370 THEM7P-201ENST00000419556 672 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 AC002127.1-201ENST00000421305 225 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.45□□□□□ -1.22
SMARCA1P28370 AC106901.1-201ENST00000425086 698 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.45□□□□□ -1.22
SMARCA1P28370 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.45□□□□□ -1.22
SMARCA1P28370 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.45□□□□□ -1.22
SMARCA1P28370 NPM1P48-201ENST00000436002 853 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.45□□□□□ -1.22
SMARCA1P28370 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC7.45□□□□□ -1.22
SMARCA1P28370 AC005165.2-201ENST00000466070 380 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.45□□□□□ -1.22
SMARCA1P28370 EIF4E2P2-201ENST00000492033 736 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 RN7SL568P-201ENST00000493069 298 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 MORF4L2P1-201ENST00000503761 858 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC7.45□□□□□ -1.22
SMARCA1P28370 KHDC1P1-201ENST00000511053 508 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.45□□□□□ -1.22
SMARCA1P28370 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC7.45□□□□□ -1.22
SMARCA1P28370 CYCSP25-201ENST00000525280 316 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMARCA1P28370 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC7.45□□□□□ -1.22
SMARCA1P28370 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.45□□□□□ -1.22
SMARCA1P28370 AC138207.8-204ENST00000579588 527 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 WBP1LP12-201ENST00000604449 331 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 AC012676.3-201ENST00000614983 479 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMARCA1P28370 AP003789.1-201ENST00000617737 605 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 AL132640.3-201ENST00000630473 177 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 AC010325.3-201ENST00000641084 394 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 AL596275.2-208ENST00000641192 594 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMARCA1P28370 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMARCA1P28370 SPATA31C1-201ENST00000420021 3895 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SMARCA1P28370 CCAT2-201ENST00000630920 1752 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMARCA1P28370 AC105235.1-201ENST00000623208 1816 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
SMARCA1P28370 AL359694.2-201ENST00000567753 1615 ntBASIC7.45□□□□□ -1.22
SMARCA1P28370 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
SMARCA1P28370 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.44□□□□□ -1.22
SMARCA1P28370 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SMARCA1P28370 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
SMARCA1P28370 AC016251.2-201ENST00000623393 3089 ntBASIC7.44□□□□□ -1.22
SMARCA1P28370 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.44□□□□□ -1.22
SMARCA1P28370 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
SMARCA1P28370 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms