Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 AC005609.2-201ENST00000623320 592 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 AC093591.3-201ENST00000634516 308 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC8.76□□□□□ -1.01
COL9A1P20849 NDUFB5-214ENST00000493866 4046 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
COL9A1P20849 THADA-205ENST00000404790 3043 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
COL9A1P20849 AC119674.1-202ENST00000641333 1860 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 RPE-201ENST00000354506 3165 ntTSL 2 BASIC8.76□□□□□ -1.01
COL9A1P20849 CCR4-201ENST00000330953 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
COL9A1P20849 ANKRD62P1-201ENST00000434304 1623 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 AC009135.2-201ENST00000624136 1768 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 SEPSECS-202ENST00000382103 5496 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
COL9A1P20849 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
COL9A1P20849 MAPK10-386ENST00000642038 2354 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 CD22-205ENST00000544992 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
COL9A1P20849 STAT6-201ENST00000300134 4034 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
COL9A1P20849 SOCS4-202ENST00000395472 6779 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
COL9A1P20849 KAT14-206ENST00000489634 3152 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
COL9A1P20849 AC055716.2-201ENST00000552545 2441 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
COL9A1P20849 AC092725.2-201ENST00000567658 1389 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 CYB561A3-221ENST00000546151 3986 ntTSL 3 BASIC8.75□□□□□ -1.01
COL9A1P20849 ABCB4-206ENST00000453593 3699 ntTSL 5 BASIC8.75□□□□□ -1.01
COL9A1P20849 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
COL9A1P20849 TACC2-210ENST00000369005 9673 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
COL9A1P20849 ATL1-201ENST00000358385 2647 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
COL9A1P20849 NDST2-202ENST00000309979 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
COL9A1P20849 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
COL9A1P20849 EYA1-206ENST00000388743 2199 ntAPPRIS ALT1 TSL 5 BASIC8.75□□□□□ -1.01
COL9A1P20849 PSD4-205ENST00000441564 11234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
COL9A1P20849 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC8.75□□□□□ -1.01
COL9A1P20849 RCAN1-207ENST00000481448 2816 ntTSL 5 BASIC8.75□□□□□ -1.01
COL9A1P20849 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
COL9A1P20849 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
COL9A1P20849 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
COL9A1P20849 RNU6-433P-201ENST00000363216 104 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 RNU6-1309P-201ENST00000363305 108 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
COL9A1P20849 AC090114.1-201ENST00000393266 448 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 PEX12P1-201ENST00000400284 1048 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 AL356967.1-201ENST00000406305 431 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 MIR1284-201ENST00000408337 120 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 RN7SKP154-201ENST00000410136 290 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 RN7SKP29-201ENST00000410957 272 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 RN7SKP279-201ENST00000411383 298 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
COL9A1P20849 AC004986.1-201ENST00000414855 607 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 CRIP1P3-201ENST00000416794 220 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 AC004830.1-201ENST00000420449 285 ntTSL 5 BASIC8.75□□□□□ -1.01
COL9A1P20849 RPL7P11-201ENST00000437586 658 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 PGBD4P3-201ENST00000440731 581 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 AL445686.1-201ENST00000443086 348 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 RPL23AP20-201ENST00000447965 421 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 WBP1LP1-201ENST00000460451 896 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 TMED10P2-201ENST00000474255 612 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 H3F3AP5-201ENST00000475267 429 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 RN7SL403P-201ENST00000481783 305 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 AL355076.1-201ENST00000484315 270 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 AC009153.1-201ENST00000485799 496 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 AP005202.1-201ENST00000489915 867 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 RPL23AP80-201ENST00000495605 424 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 B4GALNT2P1-201ENST00000508857 307 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 AC034159.1-201ENST00000513885 583 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC8.75□□□□□ -1.01
COL9A1P20849 AC008429.2-201ENST00000523057 864 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC8.75□□□□□ -1.01
COL9A1P20849 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC8.75□□□□□ -1.01
COL9A1P20849 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC8.75□□□□□ -1.01
COL9A1P20849 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC8.75□□□□□ -1.01
COL9A1P20849 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 RN7SL381P-201ENST00000577658 298 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC8.75□□□□□ -1.01
COL9A1P20849 STX8P1-201ENST00000603161 355 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 XIAPP1-201ENST00000603162 600 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 AC112191.3-201ENST00000604371 277 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 BNIP3P15-201ENST00000604600 301 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 AC016925.2-201ENST00000605108 242 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 MIR6798-201ENST00000612887 67 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
COL9A1P20849 AC119619.1-201ENST00000619728 112 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 AC087893.2-201ENST00000623272 255 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC8.75□□□□□ -1.01
COL9A1P20849 NBPF19-204ENST00000611931 2051 ntTSL 5 BASIC8.75□□□□□ -1.01
COL9A1P20849 NBPF14-205ENST00000614329 2051 ntTSL 5 BASIC8.75□□□□□ -1.01
COL9A1P20849 NBPF26-205ENST00000615219 2051 ntTSL 5 BASIC8.75□□□□□ -1.01
COL9A1P20849 NBPF14-207ENST00000616120 2051 ntTSL 5 BASIC8.75□□□□□ -1.01
COL9A1P20849 NBPF12-207ENST00000617864 2051 ntTSL 5 BASIC8.75□□□□□ -1.01
COL9A1P20849 NBPF20-204ENST00000620821 2051 ntTSL 5 BASIC8.75□□□□□ -1.01
COL9A1P20849 METTL7A-201ENST00000332160 3390 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
COL9A1P20849 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC8.75□□□□□ -1.01
COL9A1P20849 HNRNPU-216ENST00000638716 2640 ntTSL 5 BASIC8.75□□□□□ -1.01
COL9A1P20849 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
COL9A1P20849 SEZ6L-204ENST00000402979 3306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
COL9A1P20849 PRICKLE2-204ENST00000564377 8032 ntAPPRIS P2 TSL 5 BASIC8.75□□□□□ -1.01
COL9A1P20849 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
COL9A1P20849 AC009021.2-201ENST00000567401 1666 ntBASIC8.75□□□□□ -1.01
COL9A1P20849 AC044810.2-202ENST00000527847 2503 ntTSL 2 BASIC8.75□□□□□ -1.01
COL9A1P20849 NCAPD3-214ENST00000534548 5061 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
COL9A1P20849 CD59-203ENST00000415002 1878 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
COL9A1P20849 PDZK1-205ENST00000451928 1897 ntTSL 2 BASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms