Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC8.09□□□□□ -1.11
LIG1P18858 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LIG1P18858 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC8.09□□□□□ -1.11
LIG1P18858 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LIG1P18858 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LIG1P18858 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC8.09□□□□□ -1.11
LIG1P18858 RN7SKP30-201ENST00000411373 334 ntBASIC8.09□□□□□ -1.11
LIG1P18858 RPS24P7-201ENST00000416921 246 ntBASIC8.09□□□□□ -1.11
LIG1P18858 HIGD1AP4-201ENST00000430194 280 ntBASIC8.09□□□□□ -1.11
LIG1P18858 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC8.09□□□□□ -1.11
LIG1P18858 CR769776.1-201ENST00000441254 787 ntBASIC8.09□□□□□ -1.11
LIG1P18858 MTCO1P53-201ENST00000441633 699 ntBASIC8.09□□□□□ -1.11
LIG1P18858 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC8.09□□□□□ -1.11
LIG1P18858 MTND1P27-201ENST00000451117 902 ntBASIC8.09□□□□□ -1.11
LIG1P18858 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LIG1P18858 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LIG1P18858 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC8.09□□□□□ -1.11
LIG1P18858 AC096743.1-201ENST00000485172 319 ntBASIC8.09□□□□□ -1.11
LIG1P18858 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC8.09□□□□□ -1.11
LIG1P18858 AC010409.2-201ENST00000505780 478 ntBASIC8.09□□□□□ -1.11
LIG1P18858 OR7E163P-201ENST00000505943 894 ntBASIC8.09□□□□□ -1.11
LIG1P18858 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC8.09□□□□□ -1.11
LIG1P18858 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC8.09□□□□□ -1.11
LIG1P18858 AC121161.1-201ENST00000510606 652 ntBASIC8.09□□□□□ -1.11
LIG1P18858 AC016559.1-201ENST00000511420 199 ntBASIC8.09□□□□□ -1.11
LIG1P18858 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC8.09□□□□□ -1.11
LIG1P18858 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC8.09□□□□□ -1.11
LIG1P18858 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC8.09□□□□□ -1.11
LIG1P18858 GLYATL1P4-201ENST00000529326 906 ntBASIC8.09□□□□□ -1.11
LIG1P18858 OR4A21P-201ENST00000532759 944 ntBASIC8.09□□□□□ -1.11
LIG1P18858 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC8.09□□□□□ -1.11
LIG1P18858 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC8.09□□□□□ -1.11
LIG1P18858 MTCYBP23-201ENST00000558717 1102 ntBASIC8.09□□□□□ -1.11
LIG1P18858 OR4N3P-201ENST00000559395 818 ntBASIC8.09□□□□□ -1.11
LIG1P18858 RN7SL689P-201ENST00000577215 297 ntBASIC8.09□□□□□ -1.11
LIG1P18858 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LIG1P18858 AC010503.3-201ENST00000594355 540 ntBASIC8.09□□□□□ -1.11
LIG1P18858 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC8.09□□□□□ -1.11
LIG1P18858 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC8.09□□□□□ -1.11
LIG1P18858 AP001554.1-201ENST00000604533 376 ntBASIC8.09□□□□□ -1.11
LIG1P18858 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC8.09□□□□□ -1.11
LIG1P18858 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.09□□□□□ -1.11
LIG1P18858 AC135068.4-201ENST00000622949 925 ntBASIC8.09□□□□□ -1.11
LIG1P18858 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
LIG1P18858 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC8.09□□□□□ -1.11
LIG1P18858 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LIG1P18858 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LIG1P18858 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LIG1P18858 THAP12P8-201ENST00000447914 2115 ntBASIC8.09□□□□□ -1.11
LIG1P18858 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC8.09□□□□□ -1.11
LIG1P18858 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC8.09□□□□□ -1.11
LIG1P18858 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
LIG1P18858 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
LIG1P18858 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LIG1P18858 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
LIG1P18858 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
LIG1P18858 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LIG1P18858 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
LIG1P18858 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC8.09□□□□□ -1.12
LIG1P18858 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC8.09□□□□□ -1.12
LIG1P18858 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC8.08□□□□□ -1.12
LIG1P18858 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC8.08□□□□□ -1.12
LIG1P18858 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
LIG1P18858 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LIG1P18858 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LIG1P18858 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LIG1P18858 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LIG1P18858 MAPK10-344ENST00000641718 3746 ntBASIC8.08□□□□□ -1.12
LIG1P18858 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LIG1P18858 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LIG1P18858 RPL10P16-201ENST00000325000 645 ntBASIC8.08□□□□□ -1.12
LIG1P18858 OR5H2-201ENST00000355273 945 ntBASIC8.08□□□□□ -1.12
LIG1P18858 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
LIG1P18858 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC8.08□□□□□ -1.12
LIG1P18858 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC8.08□□□□□ -1.12
LIG1P18858 AL390840.1-201ENST00000420303 988 ntBASIC8.08□□□□□ -1.12
LIG1P18858 ETF1P1-206ENST00000427296 984 ntBASIC8.08□□□□□ -1.12
LIG1P18858 USP9YP24-201ENST00000434374 697 ntBASIC8.08□□□□□ -1.12
LIG1P18858 AC013410.1-201ENST00000436223 1232 ntBASIC8.08□□□□□ -1.12
LIG1P18858 AC239800.1-201ENST00000442049 719 ntBASIC8.08□□□□□ -1.12
LIG1P18858 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC8.08□□□□□ -1.12
LIG1P18858 AL355355.1-201ENST00000442900 793 ntBASIC8.08□□□□□ -1.12
LIG1P18858 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC8.08□□□□□ -1.12
LIG1P18858 USP9YP17-201ENST00000444617 696 ntBASIC8.08□□□□□ -1.12
LIG1P18858 MTCO2P7-201ENST00000446518 666 ntBASIC8.08□□□□□ -1.12
LIG1P18858 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LIG1P18858 MTCO3P16-201ENST00000454456 754 ntBASIC8.08□□□□□ -1.12
LIG1P18858 RN7SL797P-201ENST00000486314 297 ntBASIC8.08□□□□□ -1.12
LIG1P18858 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC8.08□□□□□ -1.12
LIG1P18858 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC8.08□□□□□ -1.12
LIG1P18858 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC8.08□□□□□ -1.12
LIG1P18858 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC8.08□□□□□ -1.12
LIG1P18858 AC106760.2-201ENST00000504159 619 ntBASIC8.08□□□□□ -1.12
LIG1P18858 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC8.08□□□□□ -1.12
LIG1P18858 LINC01085-203ENST00000511195 326 ntBASIC8.08□□□□□ -1.12
LIG1P18858 AC021193.1-201ENST00000511607 420 ntBASIC8.08□□□□□ -1.12
LIG1P18858 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC8.08□□□□□ -1.12
LIG1P18858 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
LIG1P18858 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC8.08□□□□□ -1.12
LIG1P18858 IGHVIII-26-1-201ENST00000520387 250 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms