Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 USP12-203ENST00000620323 349 ntTSL 3 BASIC7.33□□□□□ -1.24
NID1P14543 AC004836.1-201ENST00000623032 634 ntBASIC7.33□□□□□ -1.24
NID1P14543 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
NID1P14543 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC7.33□□□□□ -1.24
NID1P14543 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC7.33□□□□□ -1.24
NID1P14543 VPS8-228ENST00000628962 207 ntTSL 5 BASIC7.33□□□□□ -1.24
NID1P14543 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
NID1P14543 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NID1P14543 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC7.33□□□□□ -1.24
NID1P14543 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NID1P14543 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC7.33□□□□□ -1.24
NID1P14543 AC104083.1-201ENST00000569449 2615 ntBASIC7.33□□□□□ -1.24
NID1P14543 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.33□□□□□ -1.24
NID1P14543 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
NID1P14543 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NID1P14543 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
NID1P14543 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NID1P14543 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NID1P14543 AL031123.2-201ENST00000563225 3325 ntBASIC7.33□□□□□ -1.24
NID1P14543 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC7.33□□□□□ -1.24
NID1P14543 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.33□□□□□ -1.24
NID1P14543 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC7.33□□□□□ -1.24
NID1P14543 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
NID1P14543 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
NID1P14543 MTCO1P6-201ENST00000481192 1384 ntBASIC7.33□□□□□ -1.24
NID1P14543 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 AC131649.2-201ENST00000624925 4439 ntBASIC7.32□□□□□ -1.24
NID1P14543 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 SLC2A14-215ENST00000542546 3120 ntTSL 5 BASIC7.32□□□□□ -1.24
NID1P14543 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.32□□□□□ -1.24
NID1P14543 DDX11L16-201ENST00000507418 1306 ntBASIC7.32□□□□□ -1.24
NID1P14543 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC7.32□□□□□ -1.24
NID1P14543 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
NID1P14543 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
NID1P14543 RNU6-931P-201ENST00000363850 107 ntBASIC7.32□□□□□ -1.24
NID1P14543 Y_RNA.509-201ENST00000384506 99 ntBASIC7.32□□□□□ -1.24
NID1P14543 MIR30C1-201ENST00000385227 89 ntBASIC7.32□□□□□ -1.24
NID1P14543 RNU6-876P-201ENST00000391295 104 ntBASIC7.32□□□□□ -1.24
NID1P14543 RPL23AP59-201ENST00000399415 461 ntBASIC7.32□□□□□ -1.24
NID1P14543 AL080285.1-201ENST00000404225 984 ntBASIC7.32□□□□□ -1.24
NID1P14543 AL590143.1-201ENST00000405071 138 ntBASIC7.32□□□□□ -1.24
NID1P14543 CIR1P3-201ENST00000405137 479 ntBASIC7.32□□□□□ -1.24
NID1P14543 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 TRIM43CP-201ENST00000422468 1028 ntBASIC7.32□□□□□ -1.24
NID1P14543 OR8F1P-201ENST00000425243 930 ntBASIC7.32□□□□□ -1.24
NID1P14543 AC126124.1-201ENST00000426104 185 ntBASIC7.32□□□□□ -1.24
NID1P14543 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC7.32□□□□□ -1.24
NID1P14543 OSBPL10-AS1-204ENST00000436598 513 ntTSL 3 BASIC7.32□□□□□ -1.24
NID1P14543 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC7.32□□□□□ -1.24
NID1P14543 BX005266.3-201ENST00000443013 1075 ntBASIC7.32□□□□□ -1.24
NID1P14543 AC007677.1-201ENST00000445757 515 ntBASIC7.32□□□□□ -1.24
NID1P14543 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC7.32□□□□□ -1.24
NID1P14543 SUMO2P10-201ENST00000452006 288 ntBASIC7.32□□□□□ -1.24
NID1P14543 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC7.32□□□□□ -1.24
NID1P14543 RNA5SP269-201ENST00000459032 137 ntBASIC7.32□□□□□ -1.24
NID1P14543 RPL35AP19-201ENST00000469425 329 ntBASIC7.32□□□□□ -1.24
NID1P14543 RN7SL563P-201ENST00000481233 298 ntBASIC7.32□□□□□ -1.24
NID1P14543 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC7.32□□□□□ -1.24
NID1P14543 RN7SL416P-201ENST00000494042 298 ntBASIC7.32□□□□□ -1.24
NID1P14543 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 RPL7AP2-201ENST00000496515 740 ntBASIC7.32□□□□□ -1.24
NID1P14543 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC7.32□□□□□ -1.24
NID1P14543 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC7.32□□□□□ -1.24
NID1P14543 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC7.32□□□□□ -1.24
NID1P14543 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC7.32□□□□□ -1.24
NID1P14543 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC7.32□□□□□ -1.24
NID1P14543 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC7.32□□□□□ -1.24
NID1P14543 LINC01170-201ENST00000519703 406 ntTSL 5 BASIC7.32□□□□□ -1.24
NID1P14543 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC7.32□□□□□ -1.24
NID1P14543 SMARCE1P4-201ENST00000523647 241 ntBASIC7.32□□□□□ -1.24
NID1P14543 OR5AK3P-201ENST00000527486 1297 ntBASIC7.32□□□□□ -1.24
NID1P14543 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC7.32□□□□□ -1.24
NID1P14543 OR9G2P-201ENST00000533326 880 ntBASIC7.32□□□□□ -1.24
NID1P14543 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC7.32□□□□□ -1.24
NID1P14543 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC7.32□□□□□ -1.24
NID1P14543 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC7.32□□□□□ -1.24
NID1P14543 GS1-279B7.1-201ENST00000562817 399 ntTSL 5 BASIC7.32□□□□□ -1.24
NID1P14543 AC090286.3-201ENST00000573133 187 ntBASIC7.32□□□□□ -1.24
NID1P14543 MED31-202ENST00000574128 619 ntTSL 3 BASIC7.32□□□□□ -1.24
NID1P14543 MIR4262-201ENST00000578394 54 ntBASIC7.32□□□□□ -1.24
NID1P14543 RN7SL311P-201ENST00000579858 306 ntBASIC7.32□□□□□ -1.24
NID1P14543 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 AC004477.2-201ENST00000583349 192 ntTSL 3 BASIC7.32□□□□□ -1.24
NID1P14543 RN7SL664P-201ENST00000584239 305 ntBASIC7.32□□□□□ -1.24
NID1P14543 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.32□□□□□ -1.24
NID1P14543 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC7.32□□□□□ -1.24
NID1P14543 RN7SL840P-201ENST00000606883 284 ntBASIC7.32□□□□□ -1.24
NID1P14543 RNVU1-19-201ENST00000613023 167 ntBASIC7.32□□□□□ -1.24
NID1P14543 RN7SL820P-201ENST00000616437 299 ntBASIC7.32□□□□□ -1.24
NID1P14543 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NID1P14543 AC109454.4-201ENST00000623411 649 ntBASIC7.32□□□□□ -1.24
NID1P14543 AC108724.2-201ENST00000634593 290 ntBASIC7.32□□□□□ -1.24
NID1P14543 MIR3688-2-201ENST00000636963 87 ntBASIC7.32□□□□□ -1.24
NID1P14543 AC132825.8-201ENST00000640783 297 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms