Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
VTNP04004 MAPK10-323ENST00000641493 3207 ntBASIC6.9□□□□□ -1.31
VTNP04004 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
VTNP04004 AC022819.1-201ENST00000563495 3910 ntBASIC6.9□□□□□ -1.31
VTNP04004 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
VTNP04004 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.89□□□□□ -1.31
VTNP04004 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VTNP04004 AC104162.1-201ENST00000430831 2382 ntBASIC6.89□□□□□ -1.31
VTNP04004 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.89□□□□□ -1.31
VTNP04004 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VTNP04004 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
VTNP04004 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VTNP04004 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VTNP04004 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.89□□□□□ -1.31
VTNP04004 PPIAP10-201ENST00000438675 458 ntBASIC6.89□□□□□ -1.31
VTNP04004 ATP5LP2-201ENST00000440646 311 ntBASIC6.89□□□□□ -1.31
VTNP04004 BZW1P1-201ENST00000454901 1240 ntBASIC6.89□□□□□ -1.31
VTNP04004 VPS25P1-201ENST00000455691 508 ntBASIC6.89□□□□□ -1.31
VTNP04004 AC023194.2-201ENST00000465398 406 ntBASIC6.89□□□□□ -1.31
VTNP04004 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.89□□□□□ -1.31
VTNP04004 KATNBL1P4-201ENST00000503545 918 ntBASIC6.89□□□□□ -1.31
VTNP04004 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.89□□□□□ -1.31
VTNP04004 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.89□□□□□ -1.31
VTNP04004 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.89□□□□□ -1.31
VTNP04004 AC010343.2-201ENST00000510162 224 ntBASIC6.89□□□□□ -1.31
VTNP04004 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.89□□□□□ -1.31
VTNP04004 RNA5SP340-201ENST00000517132 107 ntBASIC6.89□□□□□ -1.31
VTNP04004 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.89□□□□□ -1.31
VTNP04004 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.89□□□□□ -1.31
VTNP04004 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.89□□□□□ -1.31
VTNP04004 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.89□□□□□ -1.31
VTNP04004 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.89□□□□□ -1.31
VTNP04004 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.89□□□□□ -1.31
VTNP04004 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.89□□□□□ -1.31
VTNP04004 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.89□□□□□ -1.31
VTNP04004 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.89□□□□□ -1.31
VTNP04004 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.89□□□□□ -1.31
VTNP04004 AL034408.1-201ENST00000637712 664 ntBASIC6.89□□□□□ -1.31
VTNP04004 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VTNP04004 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.89□□□□□ -1.31
VTNP04004 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
VTNP04004 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VTNP04004 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VTNP04004 GUCY1B2-204ENST00000531898 1979 ntBASIC6.89□□□□□ -1.31
VTNP04004 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VTNP04004 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.89□□□□□ -1.31
VTNP04004 AC013268.3-201ENST00000262716 2324 ntBASIC6.89□□□□□ -1.31
VTNP04004 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VTNP04004 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.89□□□□□ -1.31
VTNP04004 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
VTNP04004 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
VTNP04004 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VTNP04004 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VTNP04004 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.88□□□□□ -1.31
VTNP04004 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.88□□□□□ -1.31
VTNP04004 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.88□□□□□ -1.31
VTNP04004 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
VTNP04004 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.88□□□□□ -1.31
VTNP04004 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
VTNP04004 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.88□□□□□ -1.31
VTNP04004 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
VTNP04004 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VTNP04004 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VTNP04004 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
VTNP04004 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
VTNP04004 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.88□□□□□ -1.31
VTNP04004 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VTNP04004 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.88□□□□□ -1.31
VTNP04004 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VTNP04004 AC066692.1-201ENST00000421721 457 ntBASIC6.88□□□□□ -1.31
VTNP04004 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.88□□□□□ -1.31
VTNP04004 MORF4-201ENST00000447135 971 ntBASIC6.88□□□□□ -1.31
VTNP04004 MGAT2P1-201ENST00000449718 797 ntBASIC6.88□□□□□ -1.31
VTNP04004 VN1R38P-201ENST00000450265 887 ntBASIC6.88□□□□□ -1.31
VTNP04004 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.88□□□□□ -1.31
VTNP04004 LSM3P4-201ENST00000502948 309 ntBASIC6.88□□□□□ -1.31
VTNP04004 SUMO2P7-201ENST00000511179 285 ntBASIC6.88□□□□□ -1.31
VTNP04004 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.88□□□□□ -1.31
VTNP04004 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.88□□□□□ -1.31
VTNP04004 IGKV2-4-201ENST00000523070 340 ntBASIC6.88□□□□□ -1.31
VTNP04004 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.88□□□□□ -1.31
VTNP04004 TRIM77BP-201ENST00000524985 1119 ntBASIC6.88□□□□□ -1.31
VTNP04004 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.88□□□□□ -1.31
VTNP04004 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.88□□□□□ -1.31
VTNP04004 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.88□□□□□ -1.31
VTNP04004 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.88□□□□□ -1.31
VTNP04004 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.88□□□□□ -1.31
VTNP04004 AC068768.2-201ENST00000602352 343 ntBASIC6.88□□□□□ -1.31
VTNP04004 AC108865.2-201ENST00000606881 432 ntBASIC6.88□□□□□ -1.31
VTNP04004 AC130448.2-201ENST00000624082 374 ntBASIC6.88□□□□□ -1.31
VTNP04004 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
VTNP04004 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VTNP04004 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VTNP04004 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VTNP04004 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.88□□□□□ -1.31
VTNP04004 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
VTNP04004 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
VTNP04004 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VTNP04004 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.88□□□□□ -1.31
VTNP04004 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms