Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.54□□□□□ -1.36
TBC1D3FA6NER0 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
TBC1D3FA6NER0 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TBC1D3FA6NER0 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.54□□□□□ -1.36
TBC1D3FA6NER0 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TBC1D3FA6NER0 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 OR51C1P-202ENST00000641159 1444 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 AC009237.3-203ENST00000442128 3551 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 MIR541-201ENST00000401360 84 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 RNU6-564P-201ENST00000410983 104 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 AC099782.1-201ENST00000425889 474 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 AC083862.1-201ENST00000427378 1242 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 GAPDHP59-201ENST00000435908 267 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 GM2AP2-201ENST00000491764 562 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 RPL5P14-201ENST00000494197 878 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 AC112184.1-201ENST00000505179 312 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 AC131392.1-201ENST00000506490 633 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 RNA5SP418-201ENST00000515951 117 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 SNORA70.17-201ENST00000516449 133 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 FXNP1-201ENST00000555153 337 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 AL845552.1-201ENST00000556820 323 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 AC026826.3-201ENST00000561747 158 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 AL078601.3-201ENST00000573303 535 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 AC134669.1-201ENST00000581275 672 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 AC026898.1-201ENST00000586404 571 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 ADAD1P2-201ENST00000588476 646 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 AC020765.1-201ENST00000604296 328 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 API5P1-201ENST00000424316 1510 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 LINC01616-201ENST00000561816 2280 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 THAP12P8-201ENST00000447914 2115 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 RAD17P2-201ENST00000451754 1977 ntBASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TBC1D3FA6NER0 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
TBC1D3FA6NER0 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 MIR640-201ENST00000385086 96 ntBASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 RPL5P20-201ENST00000403848 896 ntBASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 EIF2S2P3-201ENST00000428356 999 ntBASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 AC108479.1-201ENST00000431142 427 ntBASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 OR2L9P-201ENST00000444456 913 ntBASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 DEFB109A-201ENST00000482450 265 ntBASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 AC090888.3-201ENST00000558917 509 ntBASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 MIR4502-201ENST00000580432 81 ntBASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 NPM1P45-201ENST00000583151 559 ntBASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 SMIM12P1-201ENST00000603004 274 ntBASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 AL356986.1-201ENST00000604085 341 ntBASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 AL499605.1-201ENST00000604628 403 ntBASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 AC015802.5-201ENST00000607478 399 ntBASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.52□□□□□ -1.37
TBC1D3FA6NER0 AL135999.3-201ENST00000610501 812 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms