Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 WIZP1-201ENST00000531444 2299 ntBASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC01558Q9Y6Z2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 CROCCP1-201ENST00000426910 5675 ntBASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 MIR219A2-201ENST00000608502 1504 ntBASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 PKD1P5-201ENST00000532415 10291 ntBASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 AC103702.1-201ENST00000548801 2630 ntBASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01558Q9Y6Z2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC01558Q9Y6Z2 AC131274.2-201ENST00000580697 1507 ntBASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms