Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCN10AQ9Y5Y9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.82■■□□□ 1.08
SCN10AQ9Y5Y9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCN10AQ9Y5Y9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.82■■□□□ 1.08
SCN10AQ9Y5Y9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 HLA-A-209ENST00000638375 975 ntBASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.81■■□□□ 1.08
SCN10AQ9Y5Y9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 EGLN1P1-201ENST00000531623 762 ntBASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 AC131212.4-201ENST00000623606 975 ntBASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCN10AQ9Y5Y9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SCN10AQ9Y5Y9 INGX-201ENST00000359239 846 ntBASIC21.79■■□□□ 1.08
SCN10AQ9Y5Y9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.79■■□□□ 1.08
SCN10AQ9Y5Y9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.79■■□□□ 1.08
SCN10AQ9Y5Y9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.79■■□□□ 1.08
SCN10AQ9Y5Y9 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
SCN10AQ9Y5Y9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCN10AQ9Y5Y9 AC026310.3-201ENST00000625186 2373 ntBASIC21.79■■□□□ 1.08
SCN10AQ9Y5Y9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
SCN10AQ9Y5Y9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.79■■□□□ 1.08
SCN10AQ9Y5Y9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCN10AQ9Y5Y9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCN10AQ9Y5Y9 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.79■■□□□ 1.08
SCN10AQ9Y5Y9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
SCN10AQ9Y5Y9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.79■■□□□ 1.08
SCN10AQ9Y5Y9 AC128688.1-201ENST00000487626 519 ntBASIC21.79■■□□□ 1.08
SCN10AQ9Y5Y9 MYC-208ENST00000641036 567 ntBASIC21.79■■□□□ 1.08
SCN10AQ9Y5Y9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.79■■□□□ 1.08
SCN10AQ9Y5Y9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.79■■□□□ 1.08
SCN10AQ9Y5Y9 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCN10AQ9Y5Y9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.78■■□□□ 1.08
SCN10AQ9Y5Y9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.78■■□□□ 1.08
SCN10AQ9Y5Y9 CRYGFP-201ENST00000418459 633 ntBASIC21.78■■□□□ 1.08
SCN10AQ9Y5Y9 LIN28AP1-201ENST00000429574 405 ntBASIC21.78■■□□□ 1.08
SCN10AQ9Y5Y9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
SCN10AQ9Y5Y9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.78■■□□□ 1.08
SCN10AQ9Y5Y9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SCN10AQ9Y5Y9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCN10AQ9Y5Y9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCN10AQ9Y5Y9 HMGA1P5-201ENST00000412453 271 ntBASIC21.78■■□□□ 1.08
SCN10AQ9Y5Y9 AP000692.2-201ENST00000608391 879 ntBASIC21.78■■□□□ 1.08
SCN10AQ9Y5Y9 AC092720.2-201ENST00000602388 1665 ntBASIC21.77■■□□□ 1.08
SCN10AQ9Y5Y9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.77■■□□□ 1.08
SCN10AQ9Y5Y9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN10AQ9Y5Y9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN10AQ9Y5Y9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN10AQ9Y5Y9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
SCN10AQ9Y5Y9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.77■■□□□ 1.08
SCN10AQ9Y5Y9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
SCN10AQ9Y5Y9 AK4P3-201ENST00000418260 669 ntBASIC21.77■■□□□ 1.08
SCN10AQ9Y5Y9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.77■■□□□ 1.08
SCN10AQ9Y5Y9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.77■■□□□ 1.08
SCN10AQ9Y5Y9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.77■■□□□ 1.08
SCN10AQ9Y5Y9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.77■■□□□ 1.08
SCN10AQ9Y5Y9 FAM87A-204ENST00000613235 858 ntBASIC21.77■■□□□ 1.08
SCN10AQ9Y5Y9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.77■■□□□ 1.08
SCN10AQ9Y5Y9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SCN10AQ9Y5Y9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SCN10AQ9Y5Y9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 Z85996.1-201ENST00000494644 937 ntBASIC21.76■■□□□ 1.07
SCN10AQ9Y5Y9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms