Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 KRT17P3-201ENST00000420566 1262 ntBASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 ECEL1P3-201ENST00000427961 737 ntBASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA4Q9Y5G9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 AC092368.3-202ENST00000574180 1591 ntBASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PCDHGA4Q9Y5G9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PCDHGA4Q9Y5G9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA4Q9Y5G9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHGA4Q9Y5G9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGA4Q9Y5G9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PCDHGA4Q9Y5G9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA4Q9Y5G9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGA4Q9Y5G9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA4Q9Y5G9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.46■□□□□ 0.71
PCDHGA4Q9Y5G9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDHGA4Q9Y5G9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDHGA4Q9Y5G9 RN7SL471P-201ENST00000580476 299 ntBASIC19.46■□□□□ 0.71
PCDHGA4Q9Y5G9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHGA4Q9Y5G9 Z99916.2-201ENST00000604037 246 ntBASIC19.46■□□□□ 0.71
PCDHGA4Q9Y5G9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGA4Q9Y5G9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA4Q9Y5G9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA4Q9Y5G9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHGA4Q9Y5G9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 SNORA78-201ENST00000459373 127 ntBASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 AC098799.1-201ENST00000504752 800 ntBASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PCDHGA4Q9Y5G9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA4Q9Y5G9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms