Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 AP001412.1-201ENST00000608405 714 ntBASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 AL512408.1-201ENST00000569378 2000 ntBASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 PTBP1P-201ENST00000554374 1601 ntBASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.39■□□□□ 0.7
PCDHB11Q9Y5F2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHB11Q9Y5F2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHB11Q9Y5F2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHB11Q9Y5F2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
PCDHB11Q9Y5F2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB11Q9Y5F2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB11Q9Y5F2 HLA-G-202ENST00000376815 851 ntBASIC19.39■□□□□ 0.69
PCDHB11Q9Y5F2 HLA-G-203ENST00000376818 1127 ntBASIC19.39■□□□□ 0.69
PCDHB11Q9Y5F2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB11Q9Y5F2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PCDHB11Q9Y5F2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.39■□□□□ 0.69
PCDHB11Q9Y5F2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB11Q9Y5F2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB11Q9Y5F2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB11Q9Y5F2 LINC01023-201ENST00000606054 436 ntBASIC19.39■□□□□ 0.69
PCDHB11Q9Y5F2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB11Q9Y5F2 AL391422.3-201ENST00000603791 2761 ntBASIC19.39■□□□□ 0.69
PCDHB11Q9Y5F2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB11Q9Y5F2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB11Q9Y5F2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PCDHB11Q9Y5F2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB11Q9Y5F2 SMG8-203ENST00000578922 2178 ntBASIC19.39■□□□□ 0.69
PCDHB11Q9Y5F2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
PCDHB11Q9Y5F2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 KRT8P20-201ENST00000423953 1409 ntBASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 AL031963.3-201ENST00000606441 850 ntBASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB11Q9Y5F2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 KRT8P17-201ENST00000453110 1448 ntBASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 AC211429.1-201ENST00000415277 523 ntBASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 AC012618.2-201ENST00000428058 849 ntBASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 AC005829.2-201ENST00000571422 1056 ntBASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB11Q9Y5F2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB11Q9Y5F2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms