Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 KRT17P2-201ENST00000300992 1314 ntBASIC13.58□□□□□ -0.24
LINC00588Q9Y4M8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00588Q9Y4M8 TFP1-202ENST00000475455 1573 ntBASIC13.58□□□□□ -0.24
LINC00588Q9Y4M8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00588Q9Y4M8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 MIR4785-201ENST00000585005 73 ntBASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.57□□□□□ -0.24
LINC00588Q9Y4M8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 BX119927.1-201ENST00000636596 1552 ntBASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
LINC00588Q9Y4M8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 AP002982.1-201ENST00000492365 877 ntBASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms