Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC25.09■■□□□ 1.61
RTCBQ9Y3I0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
RTCBQ9Y3I0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC25.09■■□□□ 1.61
RTCBQ9Y3I0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTCBQ9Y3I0 GOLGA6L3-201ENST00000507199 1679 ntBASIC25.08■■□□□ 1.61
RTCBQ9Y3I0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTCBQ9Y3I0 AC004951.3-201ENST00000418645 1148 ntBASIC25.08■■□□□ 1.61
RTCBQ9Y3I0 MFAP1P1-201ENST00000442257 1255 ntBASIC25.08■■□□□ 1.61
RTCBQ9Y3I0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
RTCBQ9Y3I0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTCBQ9Y3I0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RTCBQ9Y3I0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC25.08■■□□□ 1.61
RTCBQ9Y3I0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RTCBQ9Y3I0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC25.08■■□□□ 1.61
RTCBQ9Y3I0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC25.08■■□□□ 1.61
RTCBQ9Y3I0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC25.08■■□□□ 1.61
RTCBQ9Y3I0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RTCBQ9Y3I0 AC005229.4-201ENST00000610085 2198 ntBASIC25.08■■□□□ 1.61
RTCBQ9Y3I0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTCBQ9Y3I0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTCBQ9Y3I0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RTCBQ9Y3I0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RTCBQ9Y3I0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
RTCBQ9Y3I0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
RTCBQ9Y3I0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
RTCBQ9Y3I0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RTCBQ9Y3I0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTCBQ9Y3I0 AP000550.4-202ENST00000639755 178 ntBASIC25.07■■□□□ 1.6
RTCBQ9Y3I0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC25.07■■□□□ 1.6
RTCBQ9Y3I0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTCBQ9Y3I0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC25.07■■□□□ 1.6
RTCBQ9Y3I0 AC096733.2-201ENST00000609937 1394 ntBASIC25.06■■□□□ 1.6
RTCBQ9Y3I0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC25.06■■□□□ 1.6
RTCBQ9Y3I0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTCBQ9Y3I0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTCBQ9Y3I0 KRT16P6-202ENST00000425692 1426 ntBASIC25.06■■□□□ 1.6
RTCBQ9Y3I0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTCBQ9Y3I0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTCBQ9Y3I0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTCBQ9Y3I0 AC092647.4-201ENST00000457211 535 ntBASIC25.06■■□□□ 1.6
RTCBQ9Y3I0 DBP-204ENST00000599385 709 ntTSL 3 BASIC25.06■■□□□ 1.6
RTCBQ9Y3I0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTCBQ9Y3I0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RTCBQ9Y3I0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
RTCBQ9Y3I0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RTCBQ9Y3I0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC25.06■■□□□ 1.6
RTCBQ9Y3I0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
RTCBQ9Y3I0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTCBQ9Y3I0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 SLC25A1P2-201ENST00000430693 912 ntBASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 COX11P1-201ENST00000489116 835 ntBASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 KRT126P-201ENST00000549467 1181 ntBASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
RTCBQ9Y3I0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTCBQ9Y3I0 DPP3P2-201ENST00000416030 1696 ntBASIC25.04■■□□□ 1.6
RTCBQ9Y3I0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC25.04■■□□□ 1.6
RTCBQ9Y3I0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTCBQ9Y3I0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.04■■□□□ 1.6
RTCBQ9Y3I0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTCBQ9Y3I0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTCBQ9Y3I0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTCBQ9Y3I0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC25.04■■□□□ 1.6
RTCBQ9Y3I0 AC009947.2-201ENST00000444014 672 ntBASIC25.04■■□□□ 1.6
RTCBQ9Y3I0 FAM207BP-201ENST00000447172 505 ntBASIC25.04■■□□□ 1.6
RTCBQ9Y3I0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC25.04■■□□□ 1.6
RTCBQ9Y3I0 AL121894.2-201ENST00000602977 491 ntBASIC25.04■■□□□ 1.6
RTCBQ9Y3I0 AC010653.2-201ENST00000623505 997 ntBASIC25.04■■□□□ 1.6
RTCBQ9Y3I0 HLA-A-209ENST00000638375 975 ntBASIC25.04■■□□□ 1.6
RTCBQ9Y3I0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTCBQ9Y3I0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTCBQ9Y3I0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RTCBQ9Y3I0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RTCBQ9Y3I0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RTCBQ9Y3I0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC25.03■■□□□ 1.6
RTCBQ9Y3I0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC25.03■■□□□ 1.6
RTCBQ9Y3I0 CD70-202ENST00000423145 881 ntTSL 2 BASIC25.03■■□□□ 1.6
RTCBQ9Y3I0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC25.03■■□□□ 1.6
RTCBQ9Y3I0 AC007663.1-201ENST00000438948 1240 ntBASIC25.03■■□□□ 1.6
RTCBQ9Y3I0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RTCBQ9Y3I0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC25.03■■□□□ 1.6
RTCBQ9Y3I0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
RTCBQ9Y3I0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC25.03■■□□□ 1.6
RTCBQ9Y3I0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms