Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.21■□□□□ 0.83
FNDC3AQ9Y2H6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
FNDC3AQ9Y2H6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
FNDC3AQ9Y2H6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
FNDC3AQ9Y2H6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
FNDC3AQ9Y2H6 AL512408.1-201ENST00000569378 2000 ntBASIC20.2■□□□□ 0.83
FNDC3AQ9Y2H6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FNDC3AQ9Y2H6 AC112907.3-201ENST00000577781 2400 ntBASIC20.19■□□□□ 0.82
FNDC3AQ9Y2H6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.19■□□□□ 0.82
FNDC3AQ9Y2H6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FNDC3AQ9Y2H6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FNDC3AQ9Y2H6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.19■□□□□ 0.82
FNDC3AQ9Y2H6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.19■□□□□ 0.82
FNDC3AQ9Y2H6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
FNDC3AQ9Y2H6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FNDC3AQ9Y2H6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FNDC3AQ9Y2H6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.19■□□□□ 0.82
FNDC3AQ9Y2H6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
FNDC3AQ9Y2H6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FNDC3AQ9Y2H6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.19■□□□□ 0.82
FNDC3AQ9Y2H6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FNDC3AQ9Y2H6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.19■□□□□ 0.82
FNDC3AQ9Y2H6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FNDC3AQ9Y2H6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FNDC3AQ9Y2H6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FNDC3AQ9Y2H6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 FAM210CP-201ENST00000445714 574 ntBASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 GABARAPL3-202ENST00000624044 1851 ntBASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.18■□□□□ 0.82
FNDC3AQ9Y2H6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 MIR1224-201ENST00000408193 85 ntBASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 AC012618.2-201ENST00000428058 849 ntBASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FNDC3AQ9Y2H6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms