Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 GCSHP2-201ENST00000560971 527 ntBASIC31.81■■■□□ 2.68
RIMBP3Q9UFD9 ABR-217ENST00000572441 563 ntTSL 4 BASIC31.81■■■□□ 2.68
RIMBP3Q9UFD9 AP002414.4-201ENST00000589764 1148 ntBASIC31.81■■■□□ 2.68
RIMBP3Q9UFD9 AL139424.1-201ENST00000607572 797 ntBASIC31.81■■■□□ 2.68
RIMBP3Q9UFD9 AL121672.3-201ENST00000608644 468 ntBASIC31.81■■■□□ 2.68
RIMBP3Q9UFD9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
RIMBP3Q9UFD9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC31.8■■■□□ 2.68
RIMBP3Q9UFD9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
RIMBP3Q9UFD9 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
RIMBP3Q9UFD9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC31.8■■■□□ 2.68
RIMBP3Q9UFD9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
RIMBP3Q9UFD9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC31.8■■■□□ 2.68
RIMBP3Q9UFD9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC31.8■■■□□ 2.68
RIMBP3Q9UFD9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
RIMBP3Q9UFD9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
RIMBP3Q9UFD9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC31.79■■■□□ 2.68
RIMBP3Q9UFD9 IL9RP2-201ENST00000423948 1312 ntBASIC31.79■■■□□ 2.68
RIMBP3Q9UFD9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
RIMBP3Q9UFD9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC31.79■■■□□ 2.68
RIMBP3Q9UFD9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC31.79■■■□□ 2.68
RIMBP3Q9UFD9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC31.79■■■□□ 2.68
RIMBP3Q9UFD9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC31.79■■■□□ 2.68
RIMBP3Q9UFD9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
RIMBP3Q9UFD9 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
RIMBP3Q9UFD9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC31.78■■■□□ 2.68
RIMBP3Q9UFD9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
RIMBP3Q9UFD9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC31.78■■■□□ 2.68
RIMBP3Q9UFD9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC31.78■■■□□ 2.68
RIMBP3Q9UFD9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC31.78■■■□□ 2.68
RIMBP3Q9UFD9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC31.78■■■□□ 2.68
RIMBP3Q9UFD9 BX276092.5-203ENST00000456199 560 ntBASIC31.78■■■□□ 2.68
RIMBP3Q9UFD9 RNA5SP419-201ENST00000515908 135 ntBASIC31.78■■■□□ 2.68
RIMBP3Q9UFD9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC31.78■■■□□ 2.68
RIMBP3Q9UFD9 NEK4P2-201ENST00000580004 1012 ntBASIC31.78■■■□□ 2.68
RIMBP3Q9UFD9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC31.78■■■□□ 2.68
RIMBP3Q9UFD9 AL121912.1-201ENST00000603683 238 ntBASIC31.78■■■□□ 2.68
RIMBP3Q9UFD9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC31.78■■■□□ 2.68
RIMBP3Q9UFD9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
RIMBP3Q9UFD9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC31.77■■■□□ 2.68
RIMBP3Q9UFD9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC31.77■■■□□ 2.68
RIMBP3Q9UFD9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
RIMBP3Q9UFD9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC31.77■■■□□ 2.68
RIMBP3Q9UFD9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC31.77■■■□□ 2.68
RIMBP3Q9UFD9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC31.77■■■□□ 2.68
RIMBP3Q9UFD9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
RIMBP3Q9UFD9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC31.77■■■□□ 2.68
RIMBP3Q9UFD9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
RIMBP3Q9UFD9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
RIMBP3Q9UFD9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC31.77■■■□□ 2.68
RIMBP3Q9UFD9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
RIMBP3Q9UFD9 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
RIMBP3Q9UFD9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
RIMBP3Q9UFD9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC31.76■■■□□ 2.67
RIMBP3Q9UFD9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC31.76■■■□□ 2.67
RIMBP3Q9UFD9 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
RIMBP3Q9UFD9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
RIMBP3Q9UFD9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
RIMBP3Q9UFD9 PTBP1P-201ENST00000554374 1601 ntBASIC31.75■■■□□ 2.67
RIMBP3Q9UFD9 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RIMBP3Q9UFD9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC31.75■■■□□ 2.67
RIMBP3Q9UFD9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
RIMBP3Q9UFD9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC31.75■■■□□ 2.67
RIMBP3Q9UFD9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
RIMBP3Q9UFD9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC31.75■■■□□ 2.67
RIMBP3Q9UFD9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RIMBP3Q9UFD9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
RIMBP3Q9UFD9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RIMBP3Q9UFD9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
RIMBP3Q9UFD9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RIMBP3Q9UFD9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC31.75■■■□□ 2.67
RIMBP3Q9UFD9 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC31.75■■■□□ 2.67
RIMBP3Q9UFD9 CA15P1-201ENST00000481698 905 ntBASIC31.75■■■□□ 2.67
RIMBP3Q9UFD9 KRT18P58-201ENST00000527480 1120 ntBASIC31.75■■■□□ 2.67
RIMBP3Q9UFD9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
RIMBP3Q9UFD9 AP006587.1-201ENST00000534129 1502 ntBASIC31.74■■■□□ 2.67
RIMBP3Q9UFD9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC31.74■■■□□ 2.67
RIMBP3Q9UFD9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
RIMBP3Q9UFD9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC31.74■■■□□ 2.67
RIMBP3Q9UFD9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC31.74■■■□□ 2.67
RIMBP3Q9UFD9 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
RIMBP3Q9UFD9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
RIMBP3Q9UFD9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC31.74■■■□□ 2.67
RIMBP3Q9UFD9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
RIMBP3Q9UFD9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC31.73■■■□□ 2.67
RIMBP3Q9UFD9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.73■■■□□ 2.67
RIMBP3Q9UFD9 BX842568.4-201ENST00000421222 227 ntBASIC31.73■■■□□ 2.67
RIMBP3Q9UFD9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC31.73■■■□□ 2.67
RIMBP3Q9UFD9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
RIMBP3Q9UFD9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC31.73■■■□□ 2.67
RIMBP3Q9UFD9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC31.73■■■□□ 2.67
RIMBP3Q9UFD9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC31.73■■■□□ 2.67
RIMBP3Q9UFD9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
RIMBP3Q9UFD9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
RIMBP3Q9UFD9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
RIMBP3Q9UFD9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
RIMBP3Q9UFD9 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
RIMBP3Q9UFD9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC31.72■■■□□ 2.67
RIMBP3Q9UFD9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC31.72■■■□□ 2.67
RIMBP3Q9UFD9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
RIMBP3Q9UFD9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms