Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPASTQ9UBP0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 RARRES2P10-201ENST00000564312 460 ntBASIC19.69■□□□□ 0.74
SPASTQ9UBP0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 AL049637.2-201ENST00000641778 930 ntBASIC19.69■□□□□ 0.74
SPASTQ9UBP0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPASTQ9UBP0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 HLA-G-202ENST00000376815 851 ntBASIC19.68■□□□□ 0.74
SPASTQ9UBP0 HLA-G-203ENST00000376818 1127 ntBASIC19.68■□□□□ 0.74
SPASTQ9UBP0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 AC073912.3-201ENST00000624414 853 ntBASIC19.68■□□□□ 0.74
SPASTQ9UBP0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 LINC01521-201ENST00000504184 1943 ntBASIC19.68■□□□□ 0.74
SPASTQ9UBP0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPASTQ9UBP0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
SPASTQ9UBP0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPASTQ9UBP0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SPASTQ9UBP0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SPASTQ9UBP0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.67■□□□□ 0.74
SPASTQ9UBP0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPASTQ9UBP0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SPASTQ9UBP0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPASTQ9UBP0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.67■□□□□ 0.74
SPASTQ9UBP0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.67■□□□□ 0.74
SPASTQ9UBP0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SPASTQ9UBP0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.67■□□□□ 0.74
SPASTQ9UBP0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.67■□□□□ 0.74
SPASTQ9UBP0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPASTQ9UBP0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPASTQ9UBP0 AC092667.1-201ENST00000434301 2586 ntBASIC19.67■□□□□ 0.74
SPASTQ9UBP0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.67■□□□□ 0.74
SPASTQ9UBP0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SPASTQ9UBP0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPASTQ9UBP0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.66■□□□□ 0.74
SPASTQ9UBP0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SPASTQ9UBP0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPASTQ9UBP0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SPASTQ9UBP0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.66■□□□□ 0.74
SPASTQ9UBP0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.66■□□□□ 0.74
SPASTQ9UBP0 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.66■□□□□ 0.74
SPASTQ9UBP0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.66■□□□□ 0.74
SPASTQ9UBP0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SPASTQ9UBP0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.66■□□□□ 0.74
SPASTQ9UBP0 AL121906.2-201ENST00000621597 723 ntBASIC19.66■□□□□ 0.74
SPASTQ9UBP0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SPASTQ9UBP0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SPASTQ9UBP0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPASTQ9UBP0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 FEM1AP1-201ENST00000431297 1995 ntBASIC19.65■□□□□ 0.74
SPASTQ9UBP0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 TSPY7P-201ENST00000431358 1114 ntBASIC19.65■□□□□ 0.74
SPASTQ9UBP0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPASTQ9UBP0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms