Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HACD3Q9P035 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HACD3Q9P035 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
HACD3Q9P035 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20■□□□□ 0.79
HACD3Q9P035 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
HACD3Q9P035 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20■□□□□ 0.79
HACD3Q9P035 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
HACD3Q9P035 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
HACD3Q9P035 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20■□□□□ 0.79
HACD3Q9P035 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HACD3Q9P035 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HACD3Q9P035 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HACD3Q9P035 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HACD3Q9P035 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20■□□□□ 0.79
HACD3Q9P035 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20■□□□□ 0.79
HACD3Q9P035 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20■□□□□ 0.79
HACD3Q9P035 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20■□□□□ 0.79
HACD3Q9P035 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20■□□□□ 0.79
HACD3Q9P035 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HACD3Q9P035 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20■□□□□ 0.79
HACD3Q9P035 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20■□□□□ 0.79
HACD3Q9P035 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HACD3Q9P035 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HACD3Q9P035 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
HACD3Q9P035 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HACD3Q9P035 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HACD3Q9P035 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HACD3Q9P035 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HACD3Q9P035 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HACD3Q9P035 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
HACD3Q9P035 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HACD3Q9P035 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HACD3Q9P035 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.99■□□□□ 0.79
HACD3Q9P035 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HACD3Q9P035 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HACD3Q9P035 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.99■□□□□ 0.79
HACD3Q9P035 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.99■□□□□ 0.79
HACD3Q9P035 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.99■□□□□ 0.79
HACD3Q9P035 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.99■□□□□ 0.79
HACD3Q9P035 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.99■□□□□ 0.79
HACD3Q9P035 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HACD3Q9P035 TCF3P1-201ENST00000423021 1937 ntBASIC19.99■□□□□ 0.79
HACD3Q9P035 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HACD3Q9P035 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
HACD3Q9P035 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.99■□□□□ 0.79
HACD3Q9P035 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HACD3Q9P035 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
HACD3Q9P035 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
HACD3Q9P035 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HACD3Q9P035 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HACD3Q9P035 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HACD3Q9P035 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HACD3Q9P035 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HACD3Q9P035 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.98■□□□□ 0.79
HACD3Q9P035 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HACD3Q9P035 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HACD3Q9P035 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HACD3Q9P035 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HACD3Q9P035 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HACD3Q9P035 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
HACD3Q9P035 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.98■□□□□ 0.79
HACD3Q9P035 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.98■□□□□ 0.79
HACD3Q9P035 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.98■□□□□ 0.79
HACD3Q9P035 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.98■□□□□ 0.79
HACD3Q9P035 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.98■□□□□ 0.79
HACD3Q9P035 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
HACD3Q9P035 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.98■□□□□ 0.79
HACD3Q9P035 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.98■□□□□ 0.79
HACD3Q9P035 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.98■□□□□ 0.79
HACD3Q9P035 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HACD3Q9P035 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HACD3Q9P035 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
HACD3Q9P035 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HACD3Q9P035 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.98■□□□□ 0.79
HACD3Q9P035 AL391422.3-201ENST00000603791 2761 ntBASIC19.98■□□□□ 0.79
HACD3Q9P035 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HACD3Q9P035 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
HACD3Q9P035 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.98■□□□□ 0.79
HACD3Q9P035 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HACD3Q9P035 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HACD3Q9P035 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.97■□□□□ 0.79
HACD3Q9P035 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.97■□□□□ 0.79
HACD3Q9P035 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HACD3Q9P035 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.97■□□□□ 0.79
HACD3Q9P035 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HACD3Q9P035 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
HACD3Q9P035 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HACD3Q9P035 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HACD3Q9P035 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HACD3Q9P035 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HACD3Q9P035 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HACD3Q9P035 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
HACD3Q9P035 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HACD3Q9P035 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
HACD3Q9P035 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HACD3Q9P035 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
HACD3Q9P035 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.96■□□□□ 0.79
HACD3Q9P035 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.96■□□□□ 0.79
HACD3Q9P035 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
HACD3Q9P035 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms