Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX43Q9NXZ2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.11■□□□□ 0.97
DDX43Q9NXZ2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
DDX43Q9NXZ2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX43Q9NXZ2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.11■□□□□ 0.97
DDX43Q9NXZ2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX43Q9NXZ2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX43Q9NXZ2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX43Q9NXZ2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DDX43Q9NXZ2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DDX43Q9NXZ2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.11■□□□□ 0.97
DDX43Q9NXZ2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DDX43Q9NXZ2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX43Q9NXZ2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX43Q9NXZ2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX43Q9NXZ2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX43Q9NXZ2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.11■□□□□ 0.97
DDX43Q9NXZ2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DDX43Q9NXZ2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
DDX43Q9NXZ2 AC116351.2-201ENST00000606540 1585 ntBASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 Z99916.2-201ENST00000604037 246 ntBASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 PHGDH-210ENST00000641115 1638 ntBASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX43Q9NXZ2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 AC018553.1-201ENST00000616682 1458 ntBASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 MIR718-201ENST00000390190 70 ntBASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX43Q9NXZ2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX43Q9NXZ2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DDX43Q9NXZ2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
DDX43Q9NXZ2 AL157384.1-201ENST00000445995 2473 ntBASIC21.08■□□□□ 0.97
DDX43Q9NXZ2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX43Q9NXZ2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.08■□□□□ 0.97
DDX43Q9NXZ2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.08■□□□□ 0.96
DDX43Q9NXZ2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
DDX43Q9NXZ2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.08■□□□□ 0.96
DDX43Q9NXZ2 AL162377.1-201ENST00000618844 1793 ntBASIC21.08■□□□□ 0.96
DDX43Q9NXZ2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX43Q9NXZ2 TFP1-202ENST00000475455 1573 ntBASIC21.07■□□□□ 0.96
DDX43Q9NXZ2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX43Q9NXZ2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
DDX43Q9NXZ2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX43Q9NXZ2 KRT16P5-201ENST00000455284 522 ntBASIC21.07■□□□□ 0.96
DDX43Q9NXZ2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX43Q9NXZ2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
DDX43Q9NXZ2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX43Q9NXZ2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
DDX43Q9NXZ2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX43Q9NXZ2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX43Q9NXZ2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX43Q9NXZ2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX43Q9NXZ2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX43Q9NXZ2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX43Q9NXZ2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms