Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC28.52■■■□□ 2.16
SLC52A1Q9NWF4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC28.52■■■□□ 2.16
SLC52A1Q9NWF4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC28.52■■■□□ 2.16
SLC52A1Q9NWF4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC28.52■■■□□ 2.16
SLC52A1Q9NWF4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC28.52■■■□□ 2.16
SLC52A1Q9NWF4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC28.52■■■□□ 2.16
SLC52A1Q9NWF4 AC010653.2-201ENST00000623505 997 ntBASIC28.52■■■□□ 2.16
SLC52A1Q9NWF4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
SLC52A1Q9NWF4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SLC52A1Q9NWF4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC28.52■■■□□ 2.16
SLC52A1Q9NWF4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SLC52A1Q9NWF4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC28.52■■■□□ 2.16
SLC52A1Q9NWF4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SLC52A1Q9NWF4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC28.52■■■□□ 2.16
SLC52A1Q9NWF4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SLC52A1Q9NWF4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SLC52A1Q9NWF4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SLC52A1Q9NWF4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
SLC52A1Q9NWF4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
SLC52A1Q9NWF4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SLC52A1Q9NWF4 HIST1H2APS4-201ENST00000362070 348 ntBASIC28.51■■■□□ 2.15
SLC52A1Q9NWF4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SLC52A1Q9NWF4 AL031133.1-201ENST00000406807 723 ntBASIC28.51■■■□□ 2.15
SLC52A1Q9NWF4 UPK3BP1-201ENST00000428678 509 ntBASIC28.51■■■□□ 2.15
SLC52A1Q9NWF4 MFAP1P1-201ENST00000442257 1255 ntBASIC28.51■■■□□ 2.15
SLC52A1Q9NWF4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC28.51■■■□□ 2.15
SLC52A1Q9NWF4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
SLC52A1Q9NWF4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SLC52A1Q9NWF4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SLC52A1Q9NWF4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SLC52A1Q9NWF4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SLC52A1Q9NWF4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
SLC52A1Q9NWF4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SLC52A1Q9NWF4 AL117328.2-201ENST00000624617 1940 ntBASIC28.5■■■□□ 2.15
SLC52A1Q9NWF4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
SLC52A1Q9NWF4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
SLC52A1Q9NWF4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SLC52A1Q9NWF4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
SLC52A1Q9NWF4 CCR12P-201ENST00000446203 998 ntBASIC28.5■■■□□ 2.15
SLC52A1Q9NWF4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC28.5■■■□□ 2.15
SLC52A1Q9NWF4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC28.5■■■□□ 2.15
SLC52A1Q9NWF4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SLC52A1Q9NWF4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC28.5■■■□□ 2.15
SLC52A1Q9NWF4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC28.5■■■□□ 2.15
SLC52A1Q9NWF4 AC139887.4-201ENST00000607877 719 ntBASIC28.5■■■□□ 2.15
SLC52A1Q9NWF4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SLC52A1Q9NWF4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SLC52A1Q9NWF4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC28.5■■■□□ 2.15
SLC52A1Q9NWF4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
SLC52A1Q9NWF4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SLC52A1Q9NWF4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SLC52A1Q9NWF4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
SLC52A1Q9NWF4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SLC52A1Q9NWF4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
SLC52A1Q9NWF4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC28.49■■■□□ 2.15
SLC52A1Q9NWF4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
SLC52A1Q9NWF4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC28.49■■■□□ 2.15
SLC52A1Q9NWF4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC28.49■■■□□ 2.15
SLC52A1Q9NWF4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC28.49■■■□□ 2.15
SLC52A1Q9NWF4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC28.49■■■□□ 2.15
SLC52A1Q9NWF4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC28.49■■■□□ 2.15
SLC52A1Q9NWF4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC28.49■■■□□ 2.15
SLC52A1Q9NWF4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SLC52A1Q9NWF4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
SLC52A1Q9NWF4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
SLC52A1Q9NWF4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SLC52A1Q9NWF4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
SLC52A1Q9NWF4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SLC52A1Q9NWF4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SLC52A1Q9NWF4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
SLC52A1Q9NWF4 PHGDH-210ENST00000641115 1638 ntBASIC28.48■■■□□ 2.15
SLC52A1Q9NWF4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SLC52A1Q9NWF4 COPE-203ENST00000351079 907 ntTSL 2 BASIC28.48■■■□□ 2.15
SLC52A1Q9NWF4 FAM207BP-201ENST00000447172 505 ntBASIC28.48■■■□□ 2.15
SLC52A1Q9NWF4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC28.48■■■□□ 2.15
SLC52A1Q9NWF4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SLC52A1Q9NWF4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC28.48■■■□□ 2.15
SLC52A1Q9NWF4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SLC52A1Q9NWF4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SLC52A1Q9NWF4 AC092338.2-201ENST00000568827 1415 ntBASIC28.47■■■□□ 2.15
SLC52A1Q9NWF4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC28.47■■■□□ 2.15
SLC52A1Q9NWF4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC28.47■■■□□ 2.15
SLC52A1Q9NWF4 YBX1P2-201ENST00000489612 999 ntBASIC28.47■■■□□ 2.15
SLC52A1Q9NWF4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC28.47■■■□□ 2.15
SLC52A1Q9NWF4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC28.47■■■□□ 2.15
SLC52A1Q9NWF4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC28.47■■■□□ 2.15
SLC52A1Q9NWF4 BID-212ENST00000614949 1988 ntTSL 5 BASIC28.47■■■□□ 2.15
SLC52A1Q9NWF4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SLC52A1Q9NWF4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC28.46■■■□□ 2.15
SLC52A1Q9NWF4 FP700111.2-201ENST00000619190 1892 ntBASIC28.46■■■□□ 2.15
SLC52A1Q9NWF4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SLC52A1Q9NWF4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC28.46■■■□□ 2.15
SLC52A1Q9NWF4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SLC52A1Q9NWF4 TSPY5P-201ENST00000426936 936 ntBASIC28.46■■■□□ 2.15
SLC52A1Q9NWF4 AC007663.1-201ENST00000438948 1240 ntBASIC28.46■■■□□ 2.15
SLC52A1Q9NWF4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC28.46■■■□□ 2.15
SLC52A1Q9NWF4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
SLC52A1Q9NWF4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SLC52A1Q9NWF4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SLC52A1Q9NWF4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC28.45■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms