Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHB16Q9NRJ7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 AL162412.1-201ENST00000567129 965 ntBASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 AL356652.1-201ENST00000615962 565 ntBASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 MYCNOS-205ENST00000641950 531 ntBASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB16Q9NRJ7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 AC020916.1-201ENST00000587762 1774 ntBASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 KRT18P11-201ENST00000435214 1283 ntBASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 AC087633.2-202ENST00000565166 1439 ntBASIC17.13■□□□□ 0.33
PCDHB16Q9NRJ7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 TERF1P5-201ENST00000477545 1207 ntBASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHB16Q9NRJ7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms