Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TLR9Q9NR96 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TLR9Q9NR96 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.06■□□□□ 0.96
TLR9Q9NR96 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TLR9Q9NR96 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TLR9Q9NR96 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.06■□□□□ 0.96
TLR9Q9NR96 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TLR9Q9NR96 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TLR9Q9NR96 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.06■□□□□ 0.96
TLR9Q9NR96 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.06■□□□□ 0.96
TLR9Q9NR96 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.06■□□□□ 0.96
TLR9Q9NR96 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.05■□□□□ 0.96
TLR9Q9NR96 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.05■□□□□ 0.96
TLR9Q9NR96 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.05■□□□□ 0.96
TLR9Q9NR96 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TLR9Q9NR96 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
TLR9Q9NR96 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TLR9Q9NR96 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TLR9Q9NR96 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TLR9Q9NR96 TSPY14P-201ENST00000303979 915 ntBASIC21.05■□□□□ 0.96
TLR9Q9NR96 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TLR9Q9NR96 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TLR9Q9NR96 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TLR9Q9NR96 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.05■□□□□ 0.96
TLR9Q9NR96 ECEL1P2-202ENST00000465689 757 ntBASIC21.05■□□□□ 0.96
TLR9Q9NR96 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TLR9Q9NR96 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TLR9Q9NR96 WWOX-216ENST00000569818 525 ntBASIC21.05■□□□□ 0.96
TLR9Q9NR96 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.05■□□□□ 0.96
TLR9Q9NR96 AC006011.2-201ENST00000621313 1158 ntBASIC21.05■□□□□ 0.96
TLR9Q9NR96 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TLR9Q9NR96 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TLR9Q9NR96 AL121603.2-201ENST00000557373 2117 ntBASIC21.05■□□□□ 0.96
TLR9Q9NR96 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TLR9Q9NR96 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TLR9Q9NR96 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TLR9Q9NR96 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TLR9Q9NR96 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.04■□□□□ 0.96
TLR9Q9NR96 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TLR9Q9NR96 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TLR9Q9NR96 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.04■□□□□ 0.96
TLR9Q9NR96 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.04■□□□□ 0.96
TLR9Q9NR96 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.04■□□□□ 0.96
TLR9Q9NR96 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TLR9Q9NR96 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TLR9Q9NR96 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TLR9Q9NR96 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.03■□□□□ 0.96
TLR9Q9NR96 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TLR9Q9NR96 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.03■□□□□ 0.96
TLR9Q9NR96 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TLR9Q9NR96 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.03■□□□□ 0.96
TLR9Q9NR96 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TLR9Q9NR96 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.03■□□□□ 0.96
TLR9Q9NR96 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TLR9Q9NR96 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TLR9Q9NR96 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TLR9Q9NR96 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.03■□□□□ 0.96
TLR9Q9NR96 AC128688.1-201ENST00000487626 519 ntBASIC21.03■□□□□ 0.96
TLR9Q9NR96 AC097488.1-201ENST00000507834 756 ntBASIC21.03■□□□□ 0.96
TLR9Q9NR96 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.03■□□□□ 0.96
TLR9Q9NR96 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.03■□□□□ 0.96
TLR9Q9NR96 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.03■□□□□ 0.96
TLR9Q9NR96 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
TLR9Q9NR96 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TLR9Q9NR96 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TLR9Q9NR96 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TLR9Q9NR96 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TLR9Q9NR96 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.02■□□□□ 0.96
TLR9Q9NR96 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TLR9Q9NR96 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TLR9Q9NR96 CRYGFP-201ENST00000418459 633 ntBASIC21.02■□□□□ 0.96
TLR9Q9NR96 AC004980.1-204ENST00000429707 299 ntBASIC21.02■□□□□ 0.96
TLR9Q9NR96 YBX1P10-201ENST00000444752 975 ntBASIC21.02■□□□□ 0.96
TLR9Q9NR96 AC011506.1-201ENST00000474329 610 ntBASIC21.02■□□□□ 0.96
TLR9Q9NR96 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.02■□□□□ 0.96
TLR9Q9NR96 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.02■□□□□ 0.96
TLR9Q9NR96 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.02■□□□□ 0.96
TLR9Q9NR96 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TLR9Q9NR96 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TLR9Q9NR96 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TLR9Q9NR96 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TLR9Q9NR96 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.02■□□□□ 0.95
TLR9Q9NR96 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TLR9Q9NR96 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TLR9Q9NR96 AC116351.2-201ENST00000606540 1585 ntBASIC21.02■□□□□ 0.95
TLR9Q9NR96 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
TLR9Q9NR96 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TLR9Q9NR96 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TLR9Q9NR96 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.01■□□□□ 0.95
TLR9Q9NR96 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TLR9Q9NR96 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TLR9Q9NR96 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TLR9Q9NR96 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TLR9Q9NR96 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TLR9Q9NR96 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.01■□□□□ 0.95
TLR9Q9NR96 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TLR9Q9NR96 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TLR9Q9NR96 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TLR9Q9NR96 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TLR9Q9NR96 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms