Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.96■□□□□ 0.47
HMG20AQ9NP66 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.96■□□□□ 0.46
HMG20AQ9NP66 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
HMG20AQ9NP66 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
HMG20AQ9NP66 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
HMG20AQ9NP66 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.96■□□□□ 0.46
HMG20AQ9NP66 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 AL355001.2-201ENST00000620617 1191 ntBASIC17.95■□□□□ 0.46
HMG20AQ9NP66 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 TSPY26P-201ENST00000476365 1326 ntBASIC17.95■□□□□ 0.46
HMG20AQ9NP66 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMG20AQ9NP66 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 TREX1-205ENST00000625293 1783 ntBASIC17.94■□□□□ 0.46
HMG20AQ9NP66 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HMG20AQ9NP66 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20AQ9NP66 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.93■□□□□ 0.46
HMG20AQ9NP66 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.93■□□□□ 0.46
HMG20AQ9NP66 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.93■□□□□ 0.46
HMG20AQ9NP66 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20AQ9NP66 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20AQ9NP66 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.93■□□□□ 0.46
HMG20AQ9NP66 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.93■□□□□ 0.46
HMG20AQ9NP66 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.93■□□□□ 0.46
HMG20AQ9NP66 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.93■□□□□ 0.46
HMG20AQ9NP66 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20AQ9NP66 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20AQ9NP66 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20AQ9NP66 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.93■□□□□ 0.46
HMG20AQ9NP66 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20AQ9NP66 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMG20AQ9NP66 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 RASA4CP-201ENST00000424092 1398 ntBASIC17.92■□□□□ 0.46
HMG20AQ9NP66 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20AQ9NP66 AC009237.3-201ENST00000393279 1427 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms