Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CD248Q9HCU0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.74■□□□□ 0.91
CD248Q9HCU0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CD248Q9HCU0 UBE2SP1-201ENST00000450587 669 ntBASIC20.74■□□□□ 0.91
CD248Q9HCU0 RPPH1-201ENST00000516869 333 ntBASIC20.74■□□□□ 0.91
CD248Q9HCU0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD248Q9HCU0 SOX15-203ENST00000570788 1093 ntBASIC20.74■□□□□ 0.91
CD248Q9HCU0 RN7SL471P-201ENST00000580476 299 ntBASIC20.74■□□□□ 0.91
CD248Q9HCU0 GABARAPL3-202ENST00000624044 1851 ntBASIC20.74■□□□□ 0.91
CD248Q9HCU0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD248Q9HCU0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.74■□□□□ 0.91
CD248Q9HCU0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD248Q9HCU0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD248Q9HCU0 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.74■□□□□ 0.91
CD248Q9HCU0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD248Q9HCU0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CD248Q9HCU0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD248Q9HCU0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.73■□□□□ 0.91
CD248Q9HCU0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD248Q9HCU0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD248Q9HCU0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CD248Q9HCU0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD248Q9HCU0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD248Q9HCU0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.73■□□□□ 0.91
CD248Q9HCU0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.73■□□□□ 0.91
CD248Q9HCU0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD248Q9HCU0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CD248Q9HCU0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.73■□□□□ 0.91
CD248Q9HCU0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD248Q9HCU0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CD248Q9HCU0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD248Q9HCU0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.73■□□□□ 0.91
CD248Q9HCU0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CD248Q9HCU0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD248Q9HCU0 AC087633.2-202ENST00000565166 1439 ntBASIC20.72■□□□□ 0.91
CD248Q9HCU0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.72■□□□□ 0.91
CD248Q9HCU0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD248Q9HCU0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD248Q9HCU0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD248Q9HCU0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD248Q9HCU0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.72■□□□□ 0.91
CD248Q9HCU0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.72■□□□□ 0.91
CD248Q9HCU0 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.72■□□□□ 0.91
CD248Q9HCU0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.72■□□□□ 0.91
CD248Q9HCU0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
CD248Q9HCU0 AC069544.1-201ENST00000609399 999 ntBASIC20.72■□□□□ 0.91
CD248Q9HCU0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.72■□□□□ 0.91
CD248Q9HCU0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CD248Q9HCU0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD248Q9HCU0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD248Q9HCU0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD248Q9HCU0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CD248Q9HCU0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.72■□□□□ 0.91
CD248Q9HCU0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD248Q9HCU0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD248Q9HCU0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.72■□□□□ 0.91
CD248Q9HCU0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD248Q9HCU0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD248Q9HCU0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD248Q9HCU0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.72■□□□□ 0.91
CD248Q9HCU0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CD248Q9HCU0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CD248Q9HCU0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD248Q9HCU0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CD248Q9HCU0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD248Q9HCU0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CD248Q9HCU0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD248Q9HCU0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD248Q9HCU0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.71■□□□□ 0.91
CD248Q9HCU0 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.71■□□□□ 0.91
CD248Q9HCU0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.71■□□□□ 0.91
CD248Q9HCU0 C2orf69P4-201ENST00000565394 541 ntBASIC20.71■□□□□ 0.91
CD248Q9HCU0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD248Q9HCU0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD248Q9HCU0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CD248Q9HCU0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CD248Q9HCU0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CD248Q9HCU0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD248Q9HCU0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.7■□□□□ 0.9
CD248Q9HCU0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CD248Q9HCU0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD248Q9HCU0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD248Q9HCU0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CD248Q9HCU0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD248Q9HCU0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CD248Q9HCU0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CD248Q9HCU0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CD248Q9HCU0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.7■□□□□ 0.9
CD248Q9HCU0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.7■□□□□ 0.9
CD248Q9HCU0 KRT17P3-201ENST00000420566 1262 ntBASIC20.7■□□□□ 0.9
CD248Q9HCU0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.7■□□□□ 0.9
CD248Q9HCU0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CD248Q9HCU0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.7■□□□□ 0.9
CD248Q9HCU0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.7■□□□□ 0.9
CD248Q9HCU0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CD248Q9HCU0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD248Q9HCU0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD248Q9HCU0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD248Q9HCU0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.7■□□□□ 0.9
CD248Q9HCU0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms