Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 MIR4758-201ENST00000577688 71 ntBASIC18.94■□□□□ 0.62
BRF2Q9HAW0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRF2Q9HAW0 AC116351.2-201ENST00000606540 1585 ntBASIC18.93■□□□□ 0.62
BRF2Q9HAW0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
BRF2Q9HAW0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.92■□□□□ 0.62
BRF2Q9HAW0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRF2Q9HAW0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 AC018553.1-201ENST00000616682 1458 ntBASIC18.91■□□□□ 0.62
BRF2Q9HAW0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 AC007952.6-201ENST00000573168 2673 ntBASIC18.91■□□□□ 0.62
BRF2Q9HAW0 AC003957.1-201ENST00000625108 2673 ntBASIC18.91■□□□□ 0.62
BRF2Q9HAW0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.91■□□□□ 0.62
BRF2Q9HAW0 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.91■□□□□ 0.62
BRF2Q9HAW0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.91■□□□□ 0.62
BRF2Q9HAW0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRF2Q9HAW0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
BRF2Q9HAW0 AC116562.4-201ENST00000641316 2276 ntBASIC18.9■□□□□ 0.62
BRF2Q9HAW0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms