Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHMP4BQ9H444 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC24.98■■□□□ 1.59
CHMP4BQ9H444 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CHMP4BQ9H444 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
CHMP4BQ9H444 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC24.97■■□□□ 1.59
CHMP4BQ9H444 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CHMP4BQ9H444 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CHMP4BQ9H444 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CHMP4BQ9H444 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
CHMP4BQ9H444 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CHMP4BQ9H444 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CHMP4BQ9H444 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.97■■□□□ 1.59
CHMP4BQ9H444 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC24.97■■□□□ 1.59
CHMP4BQ9H444 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CHMP4BQ9H444 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC24.97■■□□□ 1.59
CHMP4BQ9H444 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC24.97■■□□□ 1.59
CHMP4BQ9H444 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CHMP4BQ9H444 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CHMP4BQ9H444 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CHMP4BQ9H444 AC116351.2-201ENST00000606540 1585 ntBASIC24.97■■□□□ 1.59
CHMP4BQ9H444 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC24.97■■□□□ 1.59
CHMP4BQ9H444 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.96■■□□□ 1.59
CHMP4BQ9H444 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC24.96■■□□□ 1.59
CHMP4BQ9H444 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CHMP4BQ9H444 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
CHMP4BQ9H444 AC125437.2-201ENST00000625180 2167 ntBASIC24.96■■□□□ 1.59
CHMP4BQ9H444 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CHMP4BQ9H444 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC24.96■■□□□ 1.59
CHMP4BQ9H444 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
CHMP4BQ9H444 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CHMP4BQ9H444 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC24.96■■□□□ 1.59
CHMP4BQ9H444 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
CHMP4BQ9H444 GATS-209ENST00000454084 1030 ntTSL 3 BASIC24.96■■□□□ 1.59
CHMP4BQ9H444 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CHMP4BQ9H444 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC24.96■■□□□ 1.59
CHMP4BQ9H444 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC24.96■■□□□ 1.59
CHMP4BQ9H444 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CHMP4BQ9H444 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CHMP4BQ9H444 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CHMP4BQ9H444 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
CHMP4BQ9H444 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
CHMP4BQ9H444 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
CHMP4BQ9H444 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
CHMP4BQ9H444 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC24.95■■□□□ 1.59
CHMP4BQ9H444 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
CHMP4BQ9H444 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
CHMP4BQ9H444 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
CHMP4BQ9H444 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC24.95■■□□□ 1.59
CHMP4BQ9H444 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 AC060766.5-201ENST00000590539 871 ntBASIC24.95■■□□□ 1.58
CHMP4BQ9H444 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.58
CHMP4BQ9H444 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 AC090192.1-201ENST00000517740 490 ntBASIC24.94■■□□□ 1.58
CHMP4BQ9H444 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 AC018553.1-201ENST00000616682 1458 ntBASIC24.94■■□□□ 1.58
CHMP4BQ9H444 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHMP4BQ9H444 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC24.93■■□□□ 1.58
CHMP4BQ9H444 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms