Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC8Q9BY41 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.73■□□□□ 0.75
HDAC8Q9BY41 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC8Q9BY41 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.73■□□□□ 0.75
HDAC8Q9BY41 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC8Q9BY41 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
HDAC8Q9BY41 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.73■□□□□ 0.75
HDAC8Q9BY41 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC8Q9BY41 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.73■□□□□ 0.75
HDAC8Q9BY41 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC8Q9BY41 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC8Q9BY41 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HDAC8Q9BY41 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
HDAC8Q9BY41 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HDAC8Q9BY41 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC8Q9BY41 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC8Q9BY41 AL162377.1-201ENST00000618844 1793 ntBASIC19.72■□□□□ 0.75
HDAC8Q9BY41 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 AL355075.4-201ENST00000554988 638 ntBASIC19.72■□□□□ 0.75
HDAC8Q9BY41 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 REXO1L12P-201ENST00000622156 912 ntBASIC19.72■□□□□ 0.75
HDAC8Q9BY41 AP001271.2-201ENST00000624018 1556 ntBASIC19.72■□□□□ 0.75
HDAC8Q9BY41 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC8Q9BY41 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC8Q9BY41 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC8Q9BY41 AL512408.1-201ENST00000569378 2000 ntBASIC19.71■□□□□ 0.75
HDAC8Q9BY41 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC8Q9BY41 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.71■□□□□ 0.75
HDAC8Q9BY41 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
HDAC8Q9BY41 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC8Q9BY41 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.71■□□□□ 0.75
HDAC8Q9BY41 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC8Q9BY41 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.71■□□□□ 0.75
HDAC8Q9BY41 NUDT16P1-203ENST00000513809 620 ntBASIC19.71■□□□□ 0.75
HDAC8Q9BY41 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.71■□□□□ 0.75
HDAC8Q9BY41 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.71■□□□□ 0.75
HDAC8Q9BY41 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.71■□□□□ 0.75
HDAC8Q9BY41 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC8Q9BY41 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
HDAC8Q9BY41 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC8Q9BY41 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC8Q9BY41 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC8Q9BY41 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC8Q9BY41 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HDAC8Q9BY41 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
HDAC8Q9BY41 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC8Q9BY41 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC8Q9BY41 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC8Q9BY41 KRT16P1-201ENST00000399124 1418 ntBASIC19.7■□□□□ 0.74
HDAC8Q9BY41 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.7■□□□□ 0.74
HDAC8Q9BY41 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HDAC8Q9BY41 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.7■□□□□ 0.74
HDAC8Q9BY41 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC8Q9BY41 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC8Q9BY41 TSPY15P-201ENST00000457163 923 ntBASIC19.7■□□□□ 0.74
HDAC8Q9BY41 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
HDAC8Q9BY41 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HDAC8Q9BY41 CR392000.1-201ENST00000624770 1228 ntBASIC19.7■□□□□ 0.74
HDAC8Q9BY41 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.7■□□□□ 0.74
HDAC8Q9BY41 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.7■□□□□ 0.74
HDAC8Q9BY41 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC8Q9BY41 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.7■□□□□ 0.74
HDAC8Q9BY41 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC8Q9BY41 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC8Q9BY41 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC8Q9BY41 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.69■□□□□ 0.74
HDAC8Q9BY41 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
HDAC8Q9BY41 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.69■□□□□ 0.74
HDAC8Q9BY41 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.69■□□□□ 0.74
HDAC8Q9BY41 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.69■□□□□ 0.74
HDAC8Q9BY41 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.69■□□□□ 0.74
HDAC8Q9BY41 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
HDAC8Q9BY41 AL445675.2-201ENST00000620291 557 ntBASIC19.69■□□□□ 0.74
HDAC8Q9BY41 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.69■□□□□ 0.74
HDAC8Q9BY41 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.69■□□□□ 0.74
HDAC8Q9BY41 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.69■□□□□ 0.74
HDAC8Q9BY41 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC8Q9BY41 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.69■□□□□ 0.74
HDAC8Q9BY41 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC8Q9BY41 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.69■□□□□ 0.74
HDAC8Q9BY41 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
HDAC8Q9BY41 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC8Q9BY41 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms