Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
YIPF4Q9BSR8 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.6■□□□□ 0.57
YIPF4Q9BSR8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.6■□□□□ 0.57
YIPF4Q9BSR8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.6■□□□□ 0.57
YIPF4Q9BSR8 AC142086.2-201ENST00000569753 217 ntBASIC18.6■□□□□ 0.57
YIPF4Q9BSR8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
YIPF4Q9BSR8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.6■□□□□ 0.57
YIPF4Q9BSR8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
YIPF4Q9BSR8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
YIPF4Q9BSR8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YIPF4Q9BSR8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YIPF4Q9BSR8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.6■□□□□ 0.57
YIPF4Q9BSR8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
YIPF4Q9BSR8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YIPF4Q9BSR8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 HLA-G-202ENST00000376815 851 ntBASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 HLA-G-203ENST00000376818 1127 ntBASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 TMEM179-206ENST00000616017 1645 ntBASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
YIPF4Q9BSR8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
YIPF4Q9BSR8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
YIPF4Q9BSR8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
YIPF4Q9BSR8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
YIPF4Q9BSR8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
YIPF4Q9BSR8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
YIPF4Q9BSR8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
YIPF4Q9BSR8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
YIPF4Q9BSR8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YIPF4Q9BSR8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms