Protein–RNA interactions for Protein: Q9BSG5

RTBDN, Retbindin, humanhuman

Predicted RBP Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTBDNQ9BSG5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTBDNQ9BSG5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTBDNQ9BSG5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTBDNQ9BSG5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.41■□□□□ 0.22
RTBDNQ9BSG5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTBDNQ9BSG5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.41■□□□□ 0.22
RTBDNQ9BSG5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTBDNQ9BSG5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.41■□□□□ 0.22
RTBDNQ9BSG5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTBDNQ9BSG5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTBDNQ9BSG5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.41■□□□□ 0.22
RTBDNQ9BSG5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 AP001271.2-201ENST00000624018 1556 ntBASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 KRT8P17-201ENST00000453110 1448 ntBASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 PGM5P4-201ENST00000421970 445 ntBASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 AC091305.1-201ENST00000479476 895 ntBASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 MIR6084-201ENST00000622012 110 ntBASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.4■□□□□ 0.22
RTBDNQ9BSG5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 AC087633.2-202ENST00000565166 1439 ntBASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 AC096631.2-201ENST00000436136 790 ntBASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 CDV3P1-201ENST00000471403 739 ntBASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 AL136967.2-201ENST00000623968 743 ntBASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTBDNQ9BSG5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 SLC7A5P1-201ENST00000568957 537 ntBASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTBDNQ9BSG5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms