Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PAAF1Q9BRP4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.19■□□□□ 0.98
PAAF1Q9BRP4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PAAF1Q9BRP4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PAAF1Q9BRP4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.19■□□□□ 0.98
PAAF1Q9BRP4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PAAF1Q9BRP4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PAAF1Q9BRP4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.19■□□□□ 0.98
PAAF1Q9BRP4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.19■□□□□ 0.98
PAAF1Q9BRP4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.19■□□□□ 0.98
PAAF1Q9BRP4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PAAF1Q9BRP4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.19■□□□□ 0.98
PAAF1Q9BRP4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PAAF1Q9BRP4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.19■□□□□ 0.98
PAAF1Q9BRP4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.19■□□□□ 0.98
PAAF1Q9BRP4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PAAF1Q9BRP4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 AC079598.2-202ENST00000546624 1451 ntBASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 BX119927.1-201ENST00000636596 1552 ntBASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PAAF1Q9BRP4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 RBM17P1-201ENST00000453646 1190 ntBASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 C1QL1P1-201ENST00000568105 661 ntBASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 AC012306.2-201ENST00000609350 630 ntBASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 KRT8P9-201ENST00000558927 1449 ntBASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PAAF1Q9BRP4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 AL391422.3-201ENST00000603791 2761 ntBASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 AL512408.1-201ENST00000569378 2000 ntBASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 KSR1P1-201ENST00000446298 240 ntBASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PAAF1Q9BRP4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.15■□□□□ 0.98
PAAF1Q9BRP4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PAAF1Q9BRP4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
PAAF1Q9BRP4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PAAF1Q9BRP4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PAAF1Q9BRP4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PAAF1Q9BRP4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PAAF1Q9BRP4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PAAF1Q9BRP4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.15■□□□□ 0.98
PAAF1Q9BRP4 YBX1P10-201ENST00000444752 975 ntBASIC21.15■□□□□ 0.98
PAAF1Q9BRP4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.15■□□□□ 0.98
PAAF1Q9BRP4 AP000525.1-201ENST00000608286 694 ntBASIC21.15■□□□□ 0.98
PAAF1Q9BRP4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
PAAF1Q9BRP4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PAAF1Q9BRP4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.15■□□□□ 0.98
PAAF1Q9BRP4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
PAAF1Q9BRP4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PAAF1Q9BRP4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms